DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6999 and AT3G56510

DIOPT Version :10

Sequence 1:NP_572523.1 Gene:CG6999 / 31837 FlyBaseID:FBgn0030085 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_191210.2 Gene:AT3G56510 / 824818 AraportID:AT3G56510 Length:257 Species:Arabidopsis thaliana


Alignment Length:228 Identity:61/228 - (26%)
Similarity:108/228 - (47%) Gaps:41/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EGESANGIANPSNDDKKELANFKATFNSWAPEKKREKMHKV-----------GVILISNIPKDMD 73
            :.|.::.:.:..:::|:.    |.|..|...::|::|:.:.           ||..:|.||..||
plant     2 QSEESHELTDGISEEKES----KETMKSQKADRKKKKLKEKLLKEASKADNRGVCYLSRIPPHMD 62

  Fly    74 GDCLKEIMNLHSVVGRVYVQPETLSSFKTKK--------NMRKGWVEFISKSGAKKIALELNNKP 130
            ...|:.|:..:..:||:|:.||...:...:|        ...:|||||..||.||::|..||.:.
plant    63 HVRLRHILAQYGELGRIYLAPEDSEAQVHRKRAGGFRGQRFSEGWVEFAKKSVAKRVADMLNGEQ 127

  Fly   131 ITDGKSSRFRGLLWKMKFLPRFKWYYLTDRMDYELAV--CKVRVWSQARKRATFWYDPDQMEYFK 193
            |...|.|.....:|.:|:|.:|||..||:.:.|:.|:  .|:.:...|.||        :.:::.
plant   128 IGGKKKSSVYYDIWNIKYLTKFKWDDLTEEIAYKSAIREQKLNMVLSAAKR--------EKDFYL 184

  Fly   194 KQVKKMKKM--------KKVKEAEMATRNAEMA 218
            .:::|.:.|        ||.|..|.:..|||.|
plant   185 SKIEKSRAMTEIDARMEKKRKIQEESGSNAEAA 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6999NP_572523.1 RRM_ABT1_like 61..150 CDD:409707 32/96 (33%)
AT3G56510NP_191210.2 RRM_ABT1_like 50..146 CDD:409707 32/95 (34%)

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