DRSC/TRiP Functional Genomics Resources

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Protein Alignment APC4 and APC4

DIOPT Version :10

Sequence 1:NP_572522.2 Gene:APC4 / 31835 FlyBaseID:FBgn0052707 Length:775 Species:Drosophila melanogaster
Sequence 2:NP_010403.3 Gene:APC4 / 851696 SGDID:S000002525 Length:652 Species:Saccharomyces cerevisiae


Alignment Length:719 Identity:129/719 - (17%)
Similarity:234/719 - (32%) Gaps:225/719 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MEWNNKMDLIAYGTEKGEVVIQRLNWQKIVTFPTPGEDVRVRSLSWQMDET---LLAVGYSNGKV 83
            :::|....:.|....||..:.:..:..::...|....:: |.:..|  |.|   .|::.:.:|.:
Yeast    10 IDYNPLFPIFATRIAKGLAIYRVSDHARLAVIPIRNINL-VANYDW--DTTTGKFLSIFFKDGTI 71

  Fly    84 ALLDA-ESGTIISGL-IYEDDIKKVYFSK-AINSQENLGTYTCNVKDKHRRFLPKL--------- 136
            .:.|. :.|.::|.| |....|.|..:.: .:..:.|...:.||:.|.    ||||         
Yeast    72 RIHDIFKDGRLVSFLRIPSTKISKGIWDRIPLRYEPNNRDFACNIIDD----LPKLIRFVKDSKR 132

  Fly   137 ---QPMTNIDPCLKTLDQKSFPKGSPCFLVVIMRSGKVHLLLLGALQAGSIDLTQHILHPHEFDV 198
               .|.|..:...:..|:..........:.|:...|.                          |.
Yeast   133 INIVPYTQPNSLWRGPDEDDLDSNEKLDVHVVFNEGN--------------------------DK 171

  Fly   199 YDVRMNGDC------------NAIYALLRDGQELILLHFQNQVLQDC-MAPMLE------LATHC 244
            ..|..|||.            |::.::::.........:::..:|.. :.|:|:      |..:.
Yeast   172 ITVFFNGDYAVFLSVDNIENENSLKSIIKVQDGFYQCFYEDGTVQTLNLGPLLQSKSSVNLLNYI 236

  Fly   245 AHILETKNYINDTQQCLTEAWETVQLEMDNKLTRYANSQPYGVISAHFLELHVFGFATFEVEEFL 309
            ..|.|...|:....:.:.....|..|:...:|...|..  ||.:.:....|.:.|..:.::|::|
Yeast   237 MVIKELIGYMLTHLEFINRELATPYLDFVKRLCDEAYG--YGKLKSELEALFLLGEISCDLEDWL 299

  Fly   310 FETLSEKGFKK--------------------------------------IANSVDLSLSNLQSLV 336
            ..::.||.||:                                      .|.|:...||....|.
Yeast   300 CNSVGEKNFKRWKYLGCEAYQKTVQILTLIFVPACERIIIYVEKLRAILQAFSIQNKLSYTSDLT 364

  Fly   337 FKQ--LNGAAINMFYFLNTIAGFGRMSHFFESLISPDVANEAMRACGGFVLKVHELQRTIDTLAY 399
            ..:  |..:...:...||:|.|.||....||....            .|..::||      .|..
Yeast   365 AVEVLLKSSQKLLTMTLNSIIGLGRDETLFEKFFI------------WFNDRLHE------ALDE 411

  Fly   400 DMKL---FHAWMIFTILRLSHQEIPDDLVL----TEEENI----AMADFICAMEPELDDRSDDED 453
            |.||   |...:.|....||:    .|.:|    ||..:|    ...|.|.:|       ||.|.
Yeast   412 DYKLKFQFEDDLYFGYDLLSY----FDRILSKKGTEPSSIIDVKLYRDLINSM-------SDMEK 465

  Fly   454 ELDSQSQTPPPARSKFNLERVGQY----LDNAYLTQLYPRDPVQLWEEM-------------VTD 501
            ::         |:|..| ..:.|:    |......|.||...:.|.:.:             ||.
Yeast   466 DI---------AQSNVN-SHIQQHILVDLKTDVFAQKYPSSQINLLDAIKLPKHNYIVYLIQVTK 520

  Fly   502 NECL-------SNCKLFVP--HDVNLSLVQQRDKMFNAIDAVFHKPTESISGSFKVSST-VICND 556
            :...       :..||::.  .|.||.::.:...:  .|.|:|.        |:::||| .:.|.
Yeast   521 HNSAQEPFSEENKKKLYIGTLKDENLGIISKESSV--KIPALFK--------SYRLSSTRFVPNR 575

  Fly   557 LPPM---------------------EPGEDHRDRDLVTCTYYVNE-ASRTDMLACT----ISGQE 595
            :..:                     |..|:..|...:....|:.| ....|.:|||    :.|:.
Yeast   576 VHSLLRDIGLSDSNYHSSHVTDYRGENYENEEDDGTIAIPAYIRENRENDDFIACTAKVSVDGRS 640

  Fly   596 AMIL 599
            |.::
Yeast   641 ASLV 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APC4NP_572522.2 ANAPC4_WD40 22..111 CDD:403945 18/94 (19%)
ANAPC4 222..418 CDD:463744 46/245 (19%)
APC4NP_010403.3 ANAPC4 223..411 CDD:463744 45/236 (19%)

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