DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1b and cdyl

DIOPT Version :9

Sequence 1:NP_001162713.1 Gene:HP1b / 31834 FlyBaseID:FBgn0030082 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_696879.5 Gene:cdyl / 568457 ZFINID:ZDB-GENE-070912-561 Length:581 Species:Danio rerio


Alignment Length:294 Identity:59/294 - (20%)
Similarity:93/294 - (31%) Gaps:109/294 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FSVERVEDKR-TVNGRTEYYLKWKGYPRSENTWEPVENL-DCPDLIANFEESLKNNKKETKKRLS 66
            :.|||:..|| ...|:|||.::|:||....:||||..:| .|.:.|..|.......:|:.....|
Zfish     8 YEVERIIGKRKNKKGKTEYLVRWRGYSFEGDTWEPEGHLSSCIEFIHEFNRQHSEKQKDGTLLRS 72

  Fly    67 TSSTPE----SIRSKRK----------------------------------SFLEDDTEEQKKLI 93
            |.|:|.    ||.::::                                  |..:.|:.:||:  
Zfish    73 TRSSPSTANTSINARKQISRPQHPSANSNTAKTSTPTPNTHPTKRPQPAQNSSNDSDSPQQKR-- 135

  Fly    94 GFERGLEASKILGAT------------------------DSSGHLMFLMK--------------- 119
              .|....|.|:|..                        ..||..:.:.|               
Zfish   136 --GRSAGTSSIMGTVTETAPTAAPAAAPTVSALRRSMDLSKSGIKILVPKSPMNSRADTEESPSE 198

  Fly   120 -----WKGSDHADLVPAKLANTRCPQVVIQF-YEERLTWHT--------------------GSGN 158
                 .:||...|.||.::|....|...::. .|||....|                    .:.|
Zfish   199 AAHSLEQGSQEPDAVPPEVALLEKPAGAMRVPGEERARMGTRPRTQTALPPPQIPITPAAVRTLN 263

  Fly   159 GNGNTNSVNLGSSGGLGSVGGSGAGDDTAPGSVG 192
            |.|.|..:...|:.|......:.||..::.|..|
Zfish   264 GKGVTTLMEASSANGTAITQSAAAGVMSSSGLTG 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1bNP_001162713.1 CHROMO 3..52 CDD:214605 20/49 (41%)
Chromo_shadow 100..151 CDD:279701 16/95 (17%)
cdylXP_696879.5 CHROMO 8..61 CDD:214605 20/52 (38%)
crotonase-like 327..523 CDD:119339
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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