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Protein Alignment HP1b and cbx5
DIOPT Version :9
Sequence 1: | NP_001162713.1 |
Gene: | HP1b / 31834 |
FlyBaseID: | FBgn0030082 |
Length: | 240 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_988907.2 |
Gene: | cbx5 / 394502 |
XenbaseID: | XB-GENE-972727 |
Length: | 200 |
Species: | Xenopus tropicalis |
Alignment Length: | 157 |
Identity: | 87/157 - (55%) |
Similarity: | 104/157 - (66%) |
Gaps: | 14/157 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 EFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLST 67
|:.||:|.|:|.|.|:.|:.|||||:....|||||..|||||:||:.|.:..| ..|||..:..|
Frog 36 EYVVEKVLDRRVVKGQVEFLLKWKGFSEEHNTWEPDRNLDCPELISEFMKKYK-KVKETDPKAKT 99
Fly 68 SSTPESIRSKRKSFLEDDTEEQKK------LIGFERGLEASKILGATDSSGHLMFLMKWKGSDHA 126
.|| |||:. .||.:.:|: ..|||||||..||:|||||.|.||||||||.||.|
Frog 100 EST------KRKAG-SDDIKAKKRRESNDIARGFERGLEPEKIIGATDSCGELMFLMKWKDSDEA 157
Fly 127 DLVPAKLANTRCPQVVIQFYEERLTWH 153
|||.||.||.:|||:||.|||||||||
Frog 158 DLVLAKEANVKCPQIVIAFYEERLTWH 184
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
90 |
1.000 |
Domainoid score |
I7655 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
179 |
1.000 |
Inparanoid score |
I3899 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1628171at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000191 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm47426 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X422 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.060 |
|
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