Protein Alignment HP1b and Cbx1

DIOPT Version :9

• Sequence 1: NP_001162713.1
• Gene: HP1b / 31834
• FlyBaseID: FBgn0030082
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: XP_006247295.1
• Gene: Cbx1 / 360609
• RGDID: 1310714
• Length: 193
• Species: Rattus norvegicus
• Alignment Length: 166
• Identity: 92/166 - (55%)
• Similarity: 110/166 - (66%)
• Gaps: 19/166 - (11%)

  Fly     3 EFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLK----NNKKETKK 63
            |:.||:|.|:|.|.|:.||.|||||:...:|||||.||||||||||.|.:|.|    .:|.:..|
  Rat    20 EYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSDGGK 84

  Fly    64 RLSTSST----PESIRSKRKS------FLEDDTEEQKKLIGFERGLEASKILGATDSSGHLMFLM 118
            |.:.|.:    .||...|:|.      ||:.:     |..||.||||..:|:|||||||.|||||
  Rat    85 RKADSDSEDKGEESKPKKKKEEALPIWFLQSE-----KPRGFARGLEPERIIGATDSSGELMFLM 144

  Fly   119 KWKGSDHADLVPAKLANTRCPQVVIQFYEERLTWHT 154
            |||.||.|||||||.||.:||||||.|||||||||:
  Rat   145 KWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHS 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1b	NP_001162713.1	CHROMO	3..52	CDD:214605	31/48 (65%)
		Chromo_shadow	100..151	CDD:279701	39/50 (78%)
Cbx1	XP_006247295.1	Chromo	27..70	CDD:278797	27/42 (64%)
		Chromo_shadow	126..177	CDD:279701	39/50 (78%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	90	1.000	Domainoid score	I7583
eggNOG	1	0.900	-	-		E1_KOG1911
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H89116
Inparanoid	1	1.050	175	1.000	Inparanoid score	I3956
OMA	1	1.010	-	-		QHG52905
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	1	1.000	-	-		FOG0000191
OrthoInspector	1	1.000	-	-		otm44379
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X422
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.840