Protein Alignment HP1b and Su(var)205

DIOPT Version :10

• Sequence 1: NP_572521.2
• Gene: HP1b / 31834
• FlyBaseID: FBgn0030082
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_476755.1
• Gene: Su(var)205 / 34119
• FlyBaseID: FBgn0003607
• Length: 206
• Species: Drosophila melanogaster
• Alignment Length: 180
• Identity: 80/180 - (44%)
• Similarity: 113/180 - (62%)
• Gaps: 28/180 - (15%)

  Fly     3 EFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNK--------- 58
            |::||::.|:|...|:.||||||||||.:||||||..||||.|||..:|.|.|:.:
  Fly    23 EYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKKDR 87

  Fly    59 -------KETKKRLSTSST------------PESIRSKRKSFLEDDTEEQKKLIGFERGLEASKI 104
                   |||:.|.|:|::            |...:|||.:..|.||.......||:|||||.||
  Fly    88 PSSSAKAKETQGRASSSTSTASKRKSEEPTAPSGNKSKRTTDAEQDTIPVSGSTGFDRGLEAEKI 152

  Fly   105 LGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERLTWHT 154
            |||:|::|.|.||:::||.|.|::||:.:||.:.|::||.||||||:|::
  Fly   153 LGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLSWYS 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1b	NP_572521.2	CD_HP1_like	3..52	CDD:349281	29/48 (60%)
		CSD	99..150	CDD:349275	28/50 (56%)
Su(var)205	NP_476755.1	CD_HP1a_insect	24..72	CDD:349300	28/47 (60%)
		CSD_HP1a_insect	146..198	CDD:349305	29/51 (57%)