Protein Alignment HP1b and Cbx5

DIOPT Version :9

• Sequence 1: NP_001162713.1
• Gene: HP1b / 31834
• FlyBaseID: FBgn0030082
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_001100267.1
• Gene: Cbx5 / 300266
• RGDID: 1306619
• Length: 191
• Species: Rattus norvegicus
• Alignment Length: 162
• Identity: 86/162 - (53%)
• Similarity: 108/162 - (66%)
• Gaps: 16/162 - (9%)

  Fly     3 EFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLK------NNK--- 58
            |:.||:|.|:|.|.|:.||.|||||:....|||||.:|||||:||:.|.:..|      |||
  Rat    19 EYVVEKVLDRRMVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGENNKPRE 83

  Fly    59 --KETKKRLSTSSTPESIRSKRKSFLEDDTEEQKKLIGFERGLEASKILGATDSSGHLMFLMKWK 121
              :..|::.|.|::.:.|:||:|....:|...     |||||||..||:|||||.|.||||||||
  Rat    84 KSEGNKRKSSFSNSADDIKSKKKREQSNDIAR-----GFERGLEPEKIIGATDSCGDLMFLMKWK 143

  Fly   122 GSDHADLVPAKLANTRCPQVVIQFYEERLTWH 153
            .:|.||||.||.||.:|||:||.|||||||||
  Rat   144 DTDEADLVLAKEANVKCPQIVIAFYEERLTWH 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1b	NP_001162713.1	CHROMO	3..52	CDD:214605	28/48 (58%)
		Chromo_shadow	100..151	CDD:279701	36/50 (72%)
Cbx5	NP_001100267.1	CD_HP1alpha_Cbx5	19..68	CDD:349298	28/48 (58%)
		CSD_HP1alpha_Cbx5	116..173	CDD:349302	42/56 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	90	1.000	Domainoid score	I7583
eggNOG	1	0.900	-	-		E1_KOG1911
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	175	1.000	Inparanoid score	I3956
OMA	1	1.010	-	-		QHG52905
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	1	1.000	-	-		FOG0000191
OrthoInspector	1	1.000	-	-		otm44379
orthoMCL	1	0.900	-	-		OOG6_104220
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X422
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.740