DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1b and heri-1

DIOPT Version :10

Sequence 1:NP_572521.2 Gene:HP1b / 31834 FlyBaseID:FBgn0030082 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_495224.2 Gene:heri-1 / 183036 WormBaseID:WBGene00016236 Length:669 Species:Caenorhabditis elegans


Alignment Length:99 Identity:34/99 - (34%)
Similarity:46/99 - (46%) Gaps:16/99 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AEFSVERVEDKRTVNGR--TEYY--LKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETK 62
            |.||.||.  |||...:  :.|:  :||.||...|.||||..|:  ||.:..:|....||....:
 Worm    37 AIFSEERF--KRTKKPQLISNYFFLVKWLGYGNKEMTWEPESNI--PDSVYLYEYKKLNNMVMNR 97

  Fly    63 KRLSTSSTPESIRSKRKSF-----LEDDTEEQKK 91
            ..|..|.|   ..|:||.:     ||:..|.:.|
 Worm    98 MNLKVSLT---FTSRRKGYTPPVILEELQERKPK 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1bNP_572521.2 CD_HP1_like 3..52 CDD:349281 20/52 (38%)
CSD 99..150 CDD:349275
heri-1NP_495224.2 CHROMO 8..92 CDD:214605 22/58 (38%)
Protein Kinases, catalytic domain 192..403 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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