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Protein Alignment HP1b and set-31
DIOPT Version :9
Sequence 1: | NP_001162713.1 |
Gene: | HP1b / 31834 |
FlyBaseID: | FBgn0030082 |
Length: | 240 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_506569.1 |
Gene: | set-31 / 179939 |
WormBaseID: | WBGene00007615 |
Length: | 503 |
Species: | Caenorhabditis elegans |
Alignment Length: | 124 |
Identity: | 27/124 - (21%) |
Similarity: | 53/124 - (42%) |
Gaps: | 40/124 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 EESLKNNKKETKK--RLSTSST----------PESIRS-----------KRKSFLEDDTEE---- 88
:.::|.|..:::| ::||.:| .:.:|| |..::...||||
Worm 16 KNAIKKNASKSRKCDKISTQNTGKVDTEFYEVQDIVRSRIEGREIQYTVKWTNWNGGDTEEAERR 80
Fly 89 ---QKKLIGF-ERGLEASKILGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVI 143
.:||:|: .|.|::|.:. :|.|.::...:..:||| ...||..|..::
Worm 81 LVCTEKLMGYAARTLKSSYVT-------NLDFFLRNLDTALSDLV--FFTNTLIPLSIV 130
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.