DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1b and Chro

DIOPT Version :10

Sequence 1:NP_572521.2 Gene:HP1b / 31834 FlyBaseID:FBgn0030082 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_061510551.1 Gene:Chro / 1280657 VectorBaseID:AGAMI1_007258 Length:1014 Species:Anopheles gambiae


Alignment Length:292 Identity:61/292 - (20%)
Similarity:101/292 - (34%) Gaps:92/292 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AEFSVERVEDKR--TVNGRTEYYLKWKGYPRSENTWEPVENL-DCPDLIANFEESLKNNKKE--- 60
            :|..||::..||  .:....||.:||......:|||||:.:| .|..::.:||..|...|::   
Mosquito   242 SEEEVEKILAKRFSPIIKMHEYLVKWARMTNDQNTWEPLTHLHSCQSILEHFEVQLAKQKEQRAA 306

  Fly    61 TKKR------------------------------------LSTSSTPES---------IRSKRKS 80
            |..|                                    .:||::|.|         :|:.:.|
Mosquito   307 TAARALQLQRQEKGGAVKPAGASATASTTGTVNTAASTTTTTTSTSPGSAAAANQLRPMRNSKTS 371

  Fly    81 FLE-------------DDTEEQKKLIGFERGLEASKILGATDSSGHLMFLMKWKGSDHA----DL 128
            .::             |.:|:   :...:|..|.....|..|.:.        .|.|.|    ..
Mosquito   372 AMDRVKQWTAGNRSPGDSSED---MASGKRKHEDGDTDGTMDGTD--------GGPDGAVKKVKT 425

  Fly   129 VPAKLANTRCPQVVIQFYEERLTWHTGSGNGNGNTNSVNLGSSGGLGSVGGSGAGDDTAPGSVGT 193
            .|:..::|...  ..|....:|...:|||..:|   .:....:||.||||.:|...:.|...:..
Mosquito   426 EPSTASDTLAK--ATQGANVKLLSGSGSGTASG---IIKTAVNGGTGSVGSAGKDGNAAEVVIIK 485

  Fly   194 T---GGGSNIDGGDEEDPEPASPIGSINQDEN 222
            |   |..|.|     ....|..|.|.:|.:.:
Mosquito   486 THQDGVASGI-----SKKVPLLPTGGVNSNSS 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1bNP_572521.2 CD_HP1_like 3..52 CDD:349281 17/51 (33%)
CSD 99..150 CDD:349275 9/54 (17%)
ChroXP_061510551.1 None

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