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Protein Alignment HP1b and Cbx3
DIOPT Version :9
Sequence 1: | NP_001162713.1 |
Gene: | HP1b / 31834 |
FlyBaseID: | FBgn0030082 |
Length: | 240 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001341931.1 |
Gene: | Cbx3 / 12417 |
MGIID: | 108515 |
Length: | 183 |
Species: | Mus musculus |
Alignment Length: | 154 |
Identity: | 87/154 - (56%) |
Similarity: | 109/154 - (70%) |
Gaps: | 8/154 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 EFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKE--TKKRL 65
||.||:|.|:|.|||:.||:|||||:..::|||||.||||||:||..|..|.|..|:: ||::.
Mouse 29 EFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKS 93
Fly 66 STSSTPESIRSKRKSFLEDDTEEQKKLIGFERGLEASKILGATDSSGHLMFLMKWKGSDHADLVP 130
.:.|..:..:||:|....| |..||.|||:..:|:|||||||.||||||||.||.||||.
Mouse 94 LSDSESDDSKSKKKRDAAD------KPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVL 152
Fly 131 AKLANTRCPQVVIQFYEERLTWHT 154
||.||.:|||:||.|||||||||:
Mouse 153 AKEANMKCPQIVIAFYEERLTWHS 176
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167833132 |
Domainoid |
1 |
1.000 |
90 |
1.000 |
Domainoid score |
I7745 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1911 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
176 |
1.000 |
Inparanoid score |
I4037 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG52905 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000191 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm42322 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_104220 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR22812 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R8954 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X422 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
13 | 12.830 |
|
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