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Protein Alignment HP1b and cbx3
DIOPT Version :9
Sequence 1: | NP_001162713.1 |
Gene: | HP1b / 31834 |
FlyBaseID: | FBgn0030082 |
Length: | 240 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017949990.2 |
Gene: | cbx3 / 100038121 |
XenbaseID: | XB-GENE-492315 |
Length: | 227 |
Species: | Xenopus tropicalis |
Alignment Length: | 161 |
Identity: | 92/161 - (57%) |
Similarity: | 114/161 - (70%) |
Gaps: | 21/161 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 EFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLST 67
||.||:|.|:|.|||:.||||||||:..|:|||||.||||||:|| |:..|::|..|::
Frog 72 EFVVEKVLDRRVVNGKVEYYLKWKGFTDSDNTWEPEENLDCPELI----EAFLNSQKAGKEK--- 129
Fly 68 SSTPESIRSKRKSFLEDDTEEQK---------KLIGFERGLEASKILGATDSSGHLMFLMKWKGS 123
|:| :||||..:.::|:.| |..||.|||:..:|:|||||||.||||||||.|
Frog 130 ---PDS--NKRKSVSDSESEDSKSKKKRETVDKPRGFARGLDPERIIGATDSSGELMFLMKWKDS 189
Fly 124 DHADLVPAKLANTRCPQVVIQFYEERLTWHT 154
|.|||||||.||.:||||||.|||||||||:
Frog 190 DEADLVPAKEANVKCPQVVIAFYEERLTWHS 220
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
90 |
1.000 |
Domainoid score |
I7655 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
179 |
1.000 |
Inparanoid score |
I3899 |
OMA |
1 |
1.010 |
- |
- |
|
QHG52905 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1628171at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000191 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm47426 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR22812 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R8954 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X422 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
11 | 11.110 |
|
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