Sequence 1: | NP_001070910.1 | Gene: | HNRNPC / 3183 | HGNCID: | 5035 | Length: | 306 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723226.1 | Gene: | x16 / 33967 | FlyBaseID: | FBgn0028554 | Length: | 258 | Species: | Drosophila melanogaster |
Alignment Length: | 249 | Identity: | 62/249 - (24%) |
---|---|---|---|
Similarity: | 97/249 - (38%) | Gaps: | 39/249 - (15%) |
- Green bases have known domain annotations that are detailed below.
Human 17 RVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNERNARAAVAGEDGRMIAGQ 78
Human 79 VLDINLAAEPKVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARV 143
Human 144 PPPPPIARAVVPSK-RQRVSGN-------TSR----RGKSGFNSKSGQRGS--SKSGKLKGDDLQ 194
Human 195 AIKKELTQIKQK----VDSLLENLEKIEKEQSKQAVEMKNDKSEEEQSSSSVKK 244 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HNRNPC | NP_001070910.1 | RRM_hnRNPC | 10..93 | CDD:410015 | 24/78 (31%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 139..190 | 21/64 (33%) | |||
Nuclear localization signal. /evidence=ECO:0000255 | 155..161 | 3/6 (50%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 221..306 | 3/24 (13%) | |||
x16 | NP_723226.1 | RRM | <1..>82 | CDD:223796 | 24/73 (33%) |
RRM_SRSF3_like | 9..81 | CDD:240819 | 24/72 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0.928771 | Normalized mean entropy | S3571 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.950 |