DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and Dgki

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_038964295.1 Gene:Dgki / 688705 RGDID:735049 Length:1112 Species:Rattus norvegicus


Alignment Length:1181 Identity:443/1181 - (37%)
Similarity:608/1181 - (51%) Gaps:202/1181 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 SGRLPALAPIISTPCS-----SADADDAGAAMGLPVRARRRSISRQEAIFVEPTGNSLENVSHEE 435
            :.|.||.||..|:..|     |..|..:.||.|              |:.:.|:.::.|...   
  Rat    15 AARGPARAPAASSALSPAGLCSGTASASSAAAG--------------AVAMNPSSSAGEERG--- 62

  Fly   436 VDNSNTKSSVDTADSLDEASTMATCGSPGAAGGSGASSSHHNAFVVRDIYLMVPDLKRDRAASVD 500
                                  ||.||  ::.||||.|....|                 ...||
  Rat    63 ----------------------ATGGS--SSSGSGAGSCCLGA-----------------EGGVD 86

  Fly   501 SCFSKLSSNAKTEELQPSADGCFLTVPNINATRSRSVDIVLPTDEQARY-KALSMTG---STVTY 561
            ...:..::.|..||  |:|.|   ......|...:..|:..  .:|..| ||:|.||   ....:
  Rat    87 PRGAGAAAAAALEE--PAAAG---QKEKEEALEEKLRDLTF--RKQVSYRKAISRTGLQHLAPAH 144

  Fly   562 ADGRTASASNSRRPIRIVPDWTENAVQGEHYWKPTSASGDLCCLNEE-C----IKSGQRMKCSAC 621
            ..|...:...::.| |...||:||||.|||.|..|:.|||||.|.|| |    .||..|.||:.|
  Rat   145 PLGLPVANGPAKEP-RATLDWSENAVNGEHLWLETNVSGDLCYLGEENCQVRFAKSALRRKCAVC 208

  Fly   622 QLVAHHNCIPFVNEKSTLACKPTYRDVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKFFPMKQAV 686
            ::|.|..||..: ||....||||:|:.|.|..|| ....||||||:.::||||||||.|..|.: 
  Rat   209 KIVVHTACIEQL-EKINFRCKPTFREGGSRSPRE-NFVRHHWVHRRRQEGKCKQCGKGFQQKFS- 270

  Fly   687 QSKLFGSKEIVALACAWCHEIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSS 751
                |.||||||::|:||.:.:|||..||....|.|.|.||.:|.:||||:||:|:         
  Rat   271 ----FHSKEIVAISCSWCKQAFHNKVTCFMLHHIEEPCSLGAHAAVIVPPTWIIKV--------- 322

  Fly   752 IRVSNKNNAASGSGG----GGAGGGAGGGG-------------------------GKSKKQTQRR 787
                .|....|..|.    |.||.|.|..|                         .:.||:|..:
  Rat   323 ----KKPQVISIPGDELELGWAGDGPGWAGDWSPSENLGFFHFYWEGWQNSLKASNRKKKRTSFK 383

  Fly   788 QK----GKEEKKEPRAFIVKPIPSPEVIPVIVFINPKSGGNQGHKLLGKFQHLLNPRQVFDLTQG 848
            :|    |.|::.:.|.|::|||.||.:.|::||:|||||||||.|:|..|...|||||||||:|.
  Rat   384 RKASKRGTEQENKGRPFVIKPISSPLMKPLLVFVNPKSGGNQGTKVLQMFMWYLNPRQVFDLSQE 448

  Fly   849 GPKMGLDMFRKAPNLRVLACGGDGTVGWVLSVLDQIQPPLQPAPAVGVLPLGTGNDLARALGWGG 913
            |||..|:::||.||||:|||||||||||:||:||::|  |.|.|.||||||||||||||.|.|||
  Rat   449 GPKDALELYRKVPNLRILACGGDGTVGWILSILDELQ--LSPQPPVGVLPLGTGNDLARTLNWGG 511

  Fly   914 SIFFQGYTDEPIGKILREIGMSQCVLMDRWRVKVTPNDDVTDDHVDRSKPNVPLNVINNYFSFGV 978
                 ||||||:.|||.::.....|.:|||.:.|..|.|:..:.::.....:||||.|||||.|.
  Rat   512 -----GYTDEPVSKILCQVEDGTIVQLDRWNLHVERNPDLPPEELEDGVCKLPLNVFNNYFSLGF 571

  Fly   979 DAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLILRQYRNLSQWVTLECDGQDFTGKLRDA 1043
            |||:.|||||:|||:||:||||.||||:|......|.:.|..|:||:.|.:.|||.|.|.|::|.
  Rat   572 DAHVTLEFHESREANPEKFNSRFRNKMFYAGAAFSDFLQRSSRDLSKHVKVVCDGTDLTPKIQDL 636

  Fly  1044 GCHAVLFLNIPSYGGGTHPW---NDSFGASKPSIDDGLMEVVGLTTYQLPMLQAGMHGTCICQCR 1105
            ....::|||||.|..||.||   .|.........|||.:||:|.|...|..||.|.||..:.|||
  Rat   637 KFQCIVFLNIPRYCAGTMPWGNPGDHHDFEPQRHDDGYIEVIGFTMASLAALQVGGHGERLHQCR 701

  Fly  1106 KARIITKRTIPMQVDGEACRVKPSVIEIELLNKALMLSKRKHGRGDVQVNPL------------- 1157
            :..::|.::||||||||.||:.|::|.|.|.|:|.|:.|.|.......:|.:             
  Rat   702 EVMLLTYKSIPMQVDGEPCRLAPAMIRISLRNQANMVQKSKRRTSMPLLNDIHQVQAADLRRVSA 766

  Fly  1158 ------------EKMQLHILRVTMQQYEQYHYDKEMLRKLANKLGQIEIESQCDLEHVRNMLN-- 1208
                        :::::.:.::::|.||..|||||.||:.:..||.:.:...||||..|..::  
  Rat   767 PPGSFTIPQSVPDRLRIRVNKISLQDYEGLHYDKEKLREASIPLGILVVRGDCDLETCRMYIDRL 831

  Fly  1209 --------------------TKFEESISYPKVSQDWCFIDSCTAEHYFRIDRAQEHLHYICDIAI 1253
                                |.|..:||..::|..|||:|:.:|:.::||||:|||||::.:|:.
  Rat   832 QEDLQSVSSGSQRVHYQDQETSFPRAISAQRLSPRWCFLDATSADRFYRIDRSQEHLHFVMEISH 896

  Fly  1254 DELYILD------HEAATMPQTPD--QERSFAAFSQRQAQNERRQMDQAQGRGPGSTDEDLQIGS 1310
            ||::|||      .:|.|.|..||  .|::............:|.:..:....|...|.||:..|
  Rat   897 DEIFILDPDMVVSQQAGTPPGMPDLVVEQASGLSDWWNPALRKRMLSDSGMITPHYEDSDLKDFS 961

  Fly  1311 KPIKVMKWKSPILEQTSDAILLAAQSGDLNMLRALHEQGYSLQSVNKNGQTALHFACKYNHRDIV 1375
            .. :|:  :||:..: ..|||.|..:|||..|...::.|.||........:.||:|.|..:.:||
  Rat   962 HS-RVL--QSPVSSE-DHAILQAVITGDLMKLMESYKNGGSLLIQGPGHCSLLHYAAKTGNGEIV 1022

  Fly  1376 KYIIASATRRLINMADKELGQTALHIAAEQNRRDICVMLVAAGAHLDTLDSGGNTPMMVAFNKNA 1440
            |||:......|::|||.|.|:||||.||.|..|.:|.:||.|||.|...||.|.||...|.....
  Rat  1023 KYILDHGPAELLDMADSETGETALHKAACQRNRAVCQLLVDAGASLRQTDSKGKTPQERAQQAGD 1087

  Fly  1441 NEIATYLESKQ 1451
            .::|.||||:|
  Rat  1088 PDLAAYLESRQ 1098

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 24/53 (45%)
C1_1 661..725 CDD:278556 33/63 (52%)
LCB5 813..1140 CDD:224513 175/329 (53%)
DAGKc 814..942 CDD:214487 81/127 (64%)
DAGKa 969..1123 CDD:214486 77/156 (49%)
ANK 1329..1447 CDD:238125 48/117 (41%)
ANK repeat 1329..1356 CDD:293786 11/26 (42%)
Ank_2 1330..1425 CDD:289560 40/94 (43%)
ANK repeat 1358..1391 CDD:293786 11/32 (34%)
ANK repeat 1393..1425 CDD:293786 17/31 (55%)
Ank_2 1399..>1459 CDD:289560 25/53 (47%)
DgkiXP_038964295.1 C1_DGKiota_rpt1 163..235 CDD:410400 37/72 (51%)
C1_DGKiota_rpt2 244..318 CDD:410446 41/78 (53%)
DAGKc 414..535 CDD:214487 81/127 (64%)
DAGKa 562..719 CDD:214486 77/156 (49%)
ANKYR 910..1109 CDD:223738 68/193 (35%)
ANK repeat 972..1003 CDD:293786 11/31 (35%)
Ank_2 977..1072 CDD:403870 40/94 (43%)
ANK repeat 1007..1038 CDD:293786 11/30 (37%)
ANK repeat 1040..1072 CDD:293786 17/31 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349558
Domainoid 1 1.000 175 1.000 Domainoid score I3546
eggNOG 1 0.900 - - E1_KOG0782
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 707 1.000 Inparanoid score I624
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143806at33208
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 1 1.000 - - otm44537
orthoMCL 1 0.900 - - OOG6_104636
Panther 1 1.100 - - LDO PTHR11255
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1934
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.760

Return to query results.
Submit another query.