DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgA and dgkb

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_021322198.1 Gene:dgkb / 557324 ZFINID:ZDB-GENE-070126-1 Length:786 Species:Danio rerio


Alignment Length:588 Identity:184/588 - (31%)
Similarity:265/588 - (45%) Gaps:120/588 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 GEHYW------KPTSASGDLCCLNEECIKSGQRMKCSACQLVAHHNCIPFVNEKSTLACKPTYRD 647
            |:|.|      ||...:   .|||.......|.:.||.|:...|..|:    .::..:|..||  
Zfish   242 GQHVWRLKHFSKPAYCN---LCLNMLIGLGKQGLCCSFCKYTVHERCV----SRAPPSCIKTY-- 297

  Fly   648 VGIRQYREQTTTHHHWVHRKLEKGKCKQCGKFFPMKQAVQSKLFGSKEIVALACAWCHEIYHNKE 712
              ::..:.....||.||.... ..||.:|.|.....|.          :..|.|.||....||| 
Zfish   298 --VKSKKNTEIMHHFWVEGNC-PSKCDKCHKTIKCYQG----------LTGLHCVWCQITLHNK- 348

  Fly   713 ACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSIRVSNKNNAASGSGGGGAGGGAGGGG 777
             |.:..|  .||..|:....|:||:.|  .|.....:|::|..:..:                 |
Zfish   349 -CASHVK--PECDCGSLRDHILPPNTI--CPVVLERQSTLRKDSNQS-----------------G 391

  Fly   778 GKSKKQTQRRQKGKEEKKEPRAFIVKPIPSPEVIPVIVFINPKSGGNQGHKLLGKFQHLLNPRQV 842
            |::|     .|:......:.:...:.|:....  |::||:||||||.||.::..|||:|||||||
Zfish   392 GRTK-----IQRTNSVSVDGQGLQITPLEGTH--PLLVFVNPKSGGKQGERIFRKFQYLLNPRQV 449

  Fly   843 FDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLS-------VLDQIQPPLQPAPAVGVLPLG 900
            ::|.:.||..|....|.....:.|.|    .:.:.||       .||:..  .:..|.|.|||||
Zfish   450 YNLAKSGPMPGYRSCRTVEYYKTLCC----PLAFSLSFNEVLFYFLDKAN--FEQNPPVCVLPLG 508

  Fly   901 TGNDLARALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRWRVKVTPNDDVTDDHVDRSKPN- 964
            |||||||.|.|||     ||..|.:.:||:::..|..|::|||::.:||        |||.:.. 
Zfish   509 TGNDLARCLHWGG-----GYDGESLLQILKDVQDSSEVMLDRWKINITP--------VDRDEGGD 560

  Fly   965 -VPLNVINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLILRQYRNLSQWVT 1028
             ||.::||||||.||||.||..||..||.||||||||.:||::|.:.|..:......:.|..::.
Zfish   561 PVPYSIINNYFSIGVDASIAHRFHIMREKHPERFNSRTKNKLWYFEFGTSETFSATCKKLHDYLE 625

  Fly  1029 LECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPWNDS--------------------------- 1066
            :||||  .|..|.:.....:..|||||..||::.|.:|                           
Zfish   626 VECDG--ITLNLSNISLEGIAILNIPSMHGGSNLWGESKKRRGHRRTGKKSPEKKTTIVDPKQLL 688

  Fly  1067 FGASKPSIDDGLMEVVGLT-TYQLPMLQAGMH--GTCICQCRKARIITKRTIPMQVDGEACRVKP 1128
            |....||  |.|:|||||. ..::..:..|:.  |..:.||....|.|.:::|||:|||.....|
Zfish   689 FAVQDPS--DQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSITIRTSKSLPMQIDGEPWMQSP 751

  Fly  1129 SVI 1131
            ..:
Zfish   752 CTL 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 13/54 (24%)
C1_1 661..725 CDD:278556 18/63 (29%)
LCB5 813..1140 CDD:224513 133/358 (37%)
DAGKc 814..942 CDD:214487 56/134 (42%)
DAGKa 969..1123 CDD:214486 65/183 (36%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
dgkbXP_021322198.1 DAG_kinase_N 7..148 CDD:316983
EFh 152..221 CDD:238008
C1 244..293 CDD:237996 13/55 (24%)
C1_1 309..360 CDD:278556 19/65 (29%)
DAGKc 421..545 CDD:214487 56/134 (42%)
DAGKa 566..746 CDD:214486 65/183 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590843
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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