DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgA and Dgkb

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_008762871.2 Gene:Dgkb / 54248 RGDID:2488 Length:803 Species:Rattus norvegicus


Alignment Length:609 Identity:211/609 - (34%)
Similarity:293/609 - (48%) Gaps:113/609 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   584 ENAVQ--GEHYW------KPTSASGDLCCLNEECIKSGQRMKCSACQLVAHHNCIPFVNEKSTLA 640
            ||.|:  |:|.|      ||...:   .|||.......|.:.||.|:...|..|:    .::..:
  Rat   235 ENNVKDDGQHVWRLKHFNKPAYCN---LCLNMLIGVGKQGLCCSFCKYTVHERCV----ARAPPS 292

  Fly   641 CKPTYRDVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKFFPMKQAVQSKLFGSKEIVALACAWCH 705
            |..||    ::..:.....||:||...... ||.:|.|.....|.          :..|.|.||.
  Rat   293 CIKTY----VKSKKNTDVMHHYWVEGNCPT-KCDKCHKTVKCYQG----------LTGLHCVWCQ 342

  Fly   706 EIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWIV-----KLPTKGNFKSSIRVSNKNNAASGSG 765
            ...|||  |.:..|  .||..|.....|:||:.|.     .:||.|   :|:....::.|.    
  Rat   343 TTLHNK--CASHLK--PECDCGPLKDHILPPTTICPVVLQTMPTAG---TSVPEERQSTAK---- 396

  Fly   766 GGGAGGGAGGGGGKSKKQTQRRQKGKEEKKEPRA---------FIVKPIPSPEVIPVIVFINPKS 821
                         |.|..:|:..|..::.|..||         ..:.|||...  |::||:||||
  Rat   397 -------------KEKGSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTH--PLLVFVNPKS 446

  Fly   822 GGNQGHKLLGKFQHLLNPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLSVLDQIQP 886
            ||.||.::..|||:|||||||:.|:..||..||..||..|:.|||||||||||||:|..:::.. 
  Rat   447 GGKQGERIYRKFQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKAN- 510

  Fly   887 PLQPAPAVGVLPLGTGNDLARALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRWRVKVTPND 951
             :...|.|.:|||||||||||.|.|||     ||..|.:.|||::|..|..:::|||:.:|||||
  Rat   511 -VVKHPPVAILPLGTGNDLARCLRWGG-----GYEGENLMKILKDIESSTEIMLDRWKFEVTPND 569

  Fly   952 DVTDDHVDRSKPNVPLNVINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLI 1016
            .      |.....||.::||||||.||||.||..||..||.|||:||||::||.:|.:.|..:..
  Rat   570 K------DEKGDPVPYSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETF 628

  Fly  1017 LRQYRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPWNDS-----------FGAS 1070
            ....:.|.:.|.:||||...  .|.:.....:..|||||..||::.|.:|           .|:.
  Rat   629 SATCKKLHESVEIECDGVQI--DLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKGSD 691

  Fly  1071 K-PSIDDG-------------LMEVVGLT-TYQLPMLQAGMH--GTCICQCRKARIITKRTIPMQ 1118
            | |::.|.             |:|||||. ..::..:..|:.  |..:.||....|.|.:::|||
  Rat   692 KRPTLTDAKELKFASQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVIRTSKSLPMQ 756

  Fly  1119 VDGEACRVKPSVIEIELLNKALML 1142
            :|||.....|..|:|...|:|.||
  Rat   757 IDGEPWMQTPCTIKITHKNQAPML 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 13/54 (24%)
C1_1 661..725 CDD:278556 18/63 (29%)
LCB5 813..1140 CDD:224513 147/354 (42%)
DAGKc 814..942 CDD:214487 67/127 (53%)
DAGKa 969..1123 CDD:214486 64/181 (35%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
DgkbXP_008762871.2 DAG_kinase_N 6..148 CDD:405237
EFh 152..221 CDD:238008
C1_DGKbeta_rpt1 237..302 CDD:410395 18/75 (24%)
C1_DGKbeta_rpt2 307..365 CDD:410441 21/72 (29%)
DAGKc 439..560 CDD:214487 67/127 (53%)
DAGKa 581..761 CDD:214486 64/181 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349562
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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