Sequence 1: | NP_001259366.1 | Gene: | rdgA / 31826 | FlyBaseID: | FBgn0261549 | Length: | 1462 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262893.1 | Gene: | CG31140 / 42836 | FlyBaseID: | FBgn0051140 | Length: | 1571 | Species: | Drosophila melanogaster |
Alignment Length: | 1452 | Identity: | 340/1452 - (23%) |
---|---|---|---|
Similarity: | 514/1452 - (35%) | Gaps: | 460/1452 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 QQQQQPSIDQLPEPTASTSNSATTKPTIATATTSTTTTSGNNFHQQLQATTAATMQRLRTTFTRS 66
Fly 67 RTPTGAEMKMQNSLEVPKQVRSASFDEMQLESQRASSSLLKQQSSSSASADERSSEAGFLQVPLA 131
Fly 132 AHQQRSHSFDSATASAG-SDDSGTFLEVPRRLKARRSSSTKTPPPCIHCHYLEEYERRMTAEQRY 195
Fly 196 FIDHRELTALSYSNTSSEASEDEDEVEGH-NAEEEEEGSAAIEDAEEETTEAATEEADEDPRTEV 259
Fly 260 ESEHDHDPDDDAALEMDIRIGNMSQGSSIEESRARLP----RQMRRHTIGSSSVTSASEDEGLEG 320
Fly 321 SDNGSPHFGNTLLPPQPTTPCGITFTLSPTNGDYPSPPHLPLDPG---SPPI-----SPCSSNSG 377
Fly 378 RLPALAPIISTPCSSADADDAGAAM---------GLPVRARRRS-ISRQEAIFVEPTGN-SLENV 431
Fly 432 S--------------HEEVDNSNTKSS-VDTADSLDE---------------------ASTMATC 460
Fly 461 GSPGAAGGSGASSSHHNAFVVRDIY--LMV----PDLKRDRAASVDSCFSKLSSNAKTEELQPSA 519
Fly 520 DGCFLTVPNINATRSRSVDIVLPTDEQARYKALS--------------MTGSTVTYADGRTASAS 570
Fly 571 NSRRPIRIVPDWTENAVQGEHYWKPTSASGDLCCLNE---------------ECIK--------S 612
Fly 613 GQRMKCSACQ------------LVAHH-------------------------------NCIPFVN 634
Fly 635 EKSTLACKPTYRDVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKF------FP------MKQAVQ 687
Fly 688 SKL--FGSKEIVALACAWCHEI--YHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNF 748
Fly 749 KSSIR--------VSNKNNAASGSGGGGAGGGAGGGGGKSKKQTQRRQKGKEEK----------- 794
Fly 795 -----------KEPRAFI-------------------VKP--IPSPEVIPVIVFINPKSGGNQGH 827
Fly 828 KLLGKFQHLLNPRQVFDLTQGGPKMG--------------------LDMFRKAPNLRVLACGGDG 872
Fly 873 TVGWVLSVLDQI-QPPLQPAPAVGVLPLGTGNDLARALGWGGSIFFQGYT--DEPIGKILREIGM 934
Fly 935 SQCVLMDRWRVKVTPNDDVTDDHVD---------RSKPNVPLNVINNYFSFGVDAHIALEFHEAR 990
Fly 991 EAHPERFNSRLRNKMYYGQMGGKDLILRQ-YRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIP 1054
Fly 1055 SYGGGTHPW----NDSFGASKPSIDDGLMEVVGLT-TYQLPMLQAGMHGTC-ICQCRKARIITKR 1113
Fly 1114 TIPMQVDGEACRVKP-SVIEIELLNKALMLSKRK-----------------------HGRGDVQV 1154
Fly 1155 --NPLEKMQLHILRVTMQQYEQ 1174 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdgA | NP_001259366.1 | C1_1 | 591..640 | CDD:278556 | 16/114 (14%) |
C1_1 | 661..725 | CDD:278556 | 14/79 (18%) | ||
LCB5 | 813..1140 | CDD:224513 | 137/366 (37%) | ||
DAGKc | 814..942 | CDD:214487 | 62/150 (41%) | ||
DAGKa | 969..1123 | CDD:214486 | 64/160 (40%) | ||
ANK | 1329..1447 | CDD:238125 | |||
ANK repeat | 1329..1356 | CDD:293786 | |||
Ank_2 | 1330..1425 | CDD:289560 | |||
ANK repeat | 1358..1391 | CDD:293786 | |||
ANK repeat | 1393..1425 | CDD:293786 | |||
Ank_2 | 1399..>1459 | CDD:289560 | |||
CG31140 | NP_001262893.1 | C1 | 6..55 | CDD:237996 | |
C1 | 69..116 | CDD:197519 | |||
C1_1 | 135..185 | CDD:278556 | |||
RA | 833..922 | CDD:279168 | 9/88 (10%) | ||
UBQ | 923..1022 | CDD:294102 | 24/133 (18%) | ||
RRM_SF | 1032..1102 | CDD:302621 | 9/69 (13%) | ||
DAGKc | 1121..1266 | CDD:214487 | 62/150 (41%) | ||
DAGK_acc | 1302..1457 | CDD:279003 | 64/160 (40%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462332 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D17792at50557 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR11255 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |