DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and Dgkh

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_038949964.1 Gene:Dgkh / 361076 RGDID:1561955 Length:1210 Species:Rattus norvegicus


Alignment Length:1406 Identity:300/1406 - (21%)
Similarity:445/1406 - (31%) Gaps:624/1406 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 MATCGSP--------GAAGGSGASSSHHNAFVVRDIYLMVPDLKRDRAASVDSCFSKLSSNAKTE 513
            ||..||.        ||..|:||.|                    ..||..    .:.||:::.|
  Rat     1 MAVAGSQHHPQGVAGGAVAGAGAVS--------------------PTAAGP----GEDSSDSEAE 41

  Fly   514 ELQP-------SADGCFLTVPNINATRSRSVDIVLPTDEQARYKA--LSMTGSTVTY-------- 561
            :..|       |..|...|..:|     :...::..|....|:|.  ..:.|.|:.|        
  Rat    42 QEGPQKLIRKVSTSGQIRTKTSI-----KEGQLLKQTSSFQRWKKRYFKLRGRTLYYAKDSKSLI 101

  Fly   562 -----------ADGRTASASNS-------RRPI------RIVPDWTEN--AVQ------------ 588
                       |:..|.:|:||       ||.:      :.:.||..:  :||            
  Rat   102 FDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCAENRKEMEDWISSLKSVQSREPYEVAQFNV 166

  Fly   589 ----GEHYWKPTS-ASGDLCCLNEECIK--SGQRMKCSACQLVAHHNCIPFVNEKSTLACK-PTY 645
                |.|.|...| |....|.:..|.:.  :...:.|..|:..||..|.    .::|..|| .|.
  Rat   167 EHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCKFKAHKRCA----VRATNNCKWTTL 227

  Fly   646 RDVG--IRQYREQTTTHHHWVHRKLE-KGKC----KQCGKFFPMKQAVQSKLFGSKEIVALACAW 703
            ..:|  |.:..:.....|.|:...|. ..||    |.||....::.              ..|.|
  Rat   228 ASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQD--------------WKCLW 278

  Fly   704 CHEIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSIRVSNKNNAASGSGGGG 768
            |..:.|.  ||  :......|.||.....|:||..:....:.|..:::.                
  Rat   279 CKTMVHT--AC--KDVYHPVCPLGQCKVSIIPPIALNSTDSDGFCRATF---------------- 323

  Fly   769 AGGGAGGGGGKSKKQTQRRQKGKEEKKEPRAFIVKPIPSPEVIPVIVFINPKSGGNQGHKLLGKF 833
                                          :|.|.|:        :||:|.|||.|||.|.|.:|
  Rat   324 ------------------------------SFCVSPL--------LVFVNSKSGDNQGVKFLRRF 350

  Fly   834 QHLLNPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLSVLDQIQPPLQPAPAVGVLP 898
            :.||||.|||||..|||.:||.:|:|..|.|:|.|||||:||||||.:|::.  |.....:||||
  Rat   351 KQLLNPAQVFDLMNGGPYLGLRLFQKFDNFRILVCGGDGSVGWVLSEIDKLN--LHKQCQLGVLP 413

  Fly   899 LGTGNDLARALGWGGSIFFQGYTDE-PIGKILREIGMSQCVLMDRWRV----------------- 945
            |||||||||.||||||     |.|: .:.:||.::..:...::|||.:                 
  Rat   414 LGTGNDLARVLGWGGS-----YDDDTQLPQILEKLERASTKMLDRWSIMTYELKLPAKASVLPEP 473

  Fly   946 ----------------------------------------------------------------- 945
                                                                             
  Rat   474 AEATEEFYMTIYEDSVANHLTKILNSDERAVVISSAKILCETVKDFVAKVEKAQDRTLENTVVAE 538

  Fly   946 ----------------------------------------------------------------- 945
                                                                             
  Rat   539 AVASKCSVLNEKLEQLLQALHADSQASRVPPGVGPAIPEEDTDTASEESLGESKDQLVNDFGKPS 603

  Fly   946 ----------------------------------------------------------------- 945
                                                                             
  Rat   604 SQKAVKPREIMLRANSLKKAVRQVIEEAGKVMDEQTVQPCEPVSPSCDYDTEADEAKEDDTKESL 668

  Fly   946 --KVTPN-------------DDVTDDHVDRSKPNVP-LN-------------------------- 968
              |.||.             |.|....:..:|.|:| ||                          
  Rat   669 SAKTTPQSPDAQASRGHSQIDSVAGPAMATTKENLPVLNTRIICPGLRAGLAASIAGSSIINKML 733

  Fly   969 ---------------------------VINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMY 1006
                                       |:||||..|:||.|:|||:..||.|||:..||.:|.|:
  Rat   734 LANVDPFGAMPFIDPDPDSLDGYSEKCVMNNYFGIGLDAKISLEFNNKREEHPEKCRSRTKNLMW 798

  Fly  1007 YGQMGGKDLILRQYRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPW-----NDS 1066
            ||.:|.::|:.|.|:||.|.|.||||||    .:.......:..||||||.|||:.|     :|.
  Rat   799 YGVLGTRELLQRSYKNLEQRVQLECDGQ----YIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDI 859

  Fly  1067 FGASKPSIDDGLMEVVGL-TTYQLP---MLQAGMHGTCICQCRKARIITKRTIPMQVDGEACRVK 1127
            |.|  ||.||.::|||.: .:.|:.   :::...|....|:..|..|.....:|:||||||....
  Rat   860 FAA--PSFDDKILEVVAVFDSVQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQP 922

  Fly  1128 PSVIEIELLNKALMLSKRKHGRGDVQVNPLEKMQLHILRVTMQQYEQYHYDKEMLRKLANKLGQI 1192
            |.:|:|...|:|.||::.:                 ....|::.:|    ||:            
  Rat   923 PGIIKIVHKNRAQMLTRDR-----------------AFESTLKSWE----DKQ------------ 954

  Fly  1193 EIESQCDLEH--VRNMLNTKFEESISYPKVSQDWCFIDSCTAEHYFRIDRAQEHLHYICDIAIDE 1255
                :||...  :|..|.......::..:|||    :..|:       ..|:|.:..|||     
  Rat   955 ----KCDTGKPVLRTNLYIHPTADLATEEVSQ----MRLCS-------QAAEELITRICD----- 999

  Fly  1256 LYILDHEAATMPQTPDQERSFAAFSQRQAQNERRQMDQAQGRGPGSTDED--------------- 1305
                   |||:....:||.:.|..:...|.|      :|..|.|.|...|               
  Rat  1000 -------AATIHCLLEQELAHAVNACSHALN------KANPRFPESLTRDTATEIAINVKALYNE 1051

  Fly  1306 ---LQIGSKPIKVMKWKSPILEQTSDAILLAAQSGDLNMLRALHEQGYSLQSVNKNGQTALHFAC 1367
               |.:|..|:.:   :||..|:.|.|:    .|.::. ||.|.|..:....:..|........|
  Rat  1052 TESLLVGRVPLHL---ESPHEERVSSAL----HSVEME-LRKLTEIPWLYYILRPNEDEEPPMDC 1108

  Fly  1368 -KYNHRDIVKYII-------------------------ASATRRLINMAD-KEL-------GQTA 1398
             |.|::..|..|:                         .:|...|:|:.: ||:       |...
  Rat  1109 TKRNNKSTVFRIVPKFKKEKAQKQKTSLQPVQNWGTEEVAAWLDLLNLGEYKEIFIRHDVRGAEL 1173

  Fly  1399 LHIAAEQNRRDICVMLVAAGAHLDTLDSG-----GNTPMMV 1434
            ||:    .|||:..:.:....|:..:..|     .|.|.:|
  Rat  1174 LHL----ERRDLKDLGIPKVGHMKRILQGIKELERNPPNLV 1210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 12/51 (24%)
C1_1 661..725 CDD:278556 14/68 (21%)
LCB5 813..1140 CDD:224513 153/617 (25%)
DAGKc 814..942 CDD:214487 67/128 (52%)
DAGKa 969..1123 CDD:214486 67/162 (41%)
ANK 1329..1447 CDD:238125 28/145 (19%)
ANK repeat 1329..1356 CDD:293786 6/26 (23%)
Ank_2 1330..1425 CDD:289560 23/128 (18%)
ANK repeat 1358..1391 CDD:293786 9/58 (16%)
ANK repeat 1393..1425 CDD:293786 8/38 (21%)
Ank_2 1399..>1459 CDD:289560 10/41 (24%)
DgkhXP_038949964.1 PH_DGK_type2 64..160 CDD:270093 18/100 (18%)
C1_DGKeta_rpt1 144..229 CDD:410398 20/88 (23%)
C1_DGKeta_rpt2 240..301 CDD:410444 17/78 (22%)
DAGKc 331..453 CDD:214487 67/128 (52%)
DAGKa 761..918 CDD:214486 67/162 (41%)
SAM_DGK-eta 1138..1202 CDD:188975 13/67 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349559
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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