DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and Dgkk

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:NP_808582.3 Gene:Dgkk / 331374 MGIID:3580254 Length:1118 Species:Mus musculus


Alignment Length:1066 Identity:246/1066 - (23%)
Similarity:365/1066 - (34%) Gaps:399/1066 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 TRSRSVDIVLPTDEQARYKALSMTGSTVTYADGRTASASNSRRPIRIVPDWTENA-VQGEHYW-- 593
            |..|.|.:|.||    |...........|...|.          ||.:|....|. :.|.|||  
Mouse   124 TPHRKVSLVAPT----RQDMEEWINIIKTVQQGE----------IRQIPAAENNPFLVGMHYWYS 174

  Fly   594 --KPTSASGDLCCLNEECIKSGQRMKCSACQLVAHHNCIPFVNEKSTLACK---PTYRDVGIRQY 653
              .|.|...::|..|...: |...:.|..||:.:|..|....|:.    ||   .:..|..:...
Mouse   175 SSNPRSHFCNVCRENIPAL-SRDAVTCEVCQVKSHKFCALRANKD----CKWNTLSVTDDLLLPA 234

  Fly   654 REQTTTHHHWVHRKLEKG-KC----KQCGKFFPMKQAVQSKLFGSKEIVALACAWCHEIYHNKEA 713
            .|..|..|.||...:..| :|    |.||....::.              ..|.||....|.  |
Mouse   235 DEIQTMPHQWVEGNIPAGSQCVVCHKSCGSHHRLQD--------------FRCLWCGSTVHG--A 283

  Fly   714 CFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSIRVSNKNNAASGSGGGGAGGGAGGGGG 778
            |  |.:..:||..|:....||||:                      |.|...|.|          
Mouse   284 C--QKRFSKECSFGSRRSSIVPPT----------------------ALSDPRGDG---------- 314

  Fly   779 KSKKQTQRRQKGKEEKKEPRAFIVKP------IPSPEVIPVIVFINPKSGGNQGHKLLGKFQHLL 837
                                ..:|.|      .|.....|:::|||.|||.:||...|.||:..|
Mouse   315 --------------------QLVVSPDFWNLDWPLTCSCPLLIFINSKSGDHQGIIFLRKFKQYL 359

  Fly   838 NPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLSVLDQIQPPLQPAPAVGVLPLGTG 902
            ||.|||||.:|||:.|:.||:.....|||.|||||:|.||||.:|..  .|.....:.::|||||
Mouse   360 NPSQVFDLAKGGPEAGIAMFKNFARFRVLVCGGDGSVSWVLSTIDAY--GLHDRCQLAIIPLGTG 422

  Fly   903 NDLARALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRWRVKV--TP---------------- 949
            |||||.||| |:::.:|  ..|: .||..:..:...::|||.|.:  ||                
Mouse   423 NDLARVLGW-GAVWSKG--TSPL-DILSRVEQAHVRILDRWSVMIRETPRQAPLLKGQVAMDIPR 483

  Fly   950 ---------------------------------------NDDVTD-------------------- 955
                                                   .|.|.|                    
Mouse   484 FEAAAIKNVESATTELNKILKAKYPTEMVIATRFLCSAVEDFVEDIVKAWHQIKQNSTAVESVIL 548

  Fly   956 -----------------------------------------------DHVDRSK----------- 962
                                                           ||:.|:|           
Mouse   549 KSDLMYDKLSVLIDLLAEDAVAASAERTATAYGSRSQADGKPFVPQLDHIARAKLELAERAQKLQ 613

  Fly   963 ----------------------------------------------------------------- 962
                                                                             
Mouse   614 QSLKLIIFQVEQVLDEESRQSLSVKNFTSSLFLGDGDDDDSDDYDQSPRHRSRCDILCSIPSLRN 678

  Fly   963 ---PNVPLN---------------VINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQ 1009
               .|:.|.               |:||||..|:||.|:|||:..||.|||::||||:||::||.
Mouse   679 EDLDNLDLEHLHIAPETIRFKEKCVMNNYFGIGLDAKISLEFNSRREEHPEQYNSRLKNKIWYGL 743

  Fly  1010 MGGKDLILRQYRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPWNDSFGASK--- 1071
            :|.|:|:.|.||.|.:.:.|||||:    .:.......::.|||.||.||.:.|..:...::   
Mouse   744 LGSKELLQRSYRKLEERIHLECDGE----AVSLPNLQGIVVLNITSYAGGVNFWGRNRATTEYDV 804

  Fly  1072 PSIDDGLMEVVGL-TTYQLPMLQ-AGMHGTCICQCRKARIIT---KRTIPMQVDGEACRVKPSVI 1131
            |:|:||.:|||.: .:.|:.|.: ..:....|.||.:. :||   :..:|:||||||...||.:|
Mouse   805 PAINDGKLEVVAIFGSVQMAMSRIVNLQQHRIAQCHEV-VITIDGEDGVPVQVDGEAWIQKPGLI 868

  Fly  1132 EIELLNKALMLSKRKHGRGDVQVNPLEKMQLHILR---VTMQQYEQYHYDKEM-----LRKLANK 1188
            :|:..|.|.||.:.:.....::....:..::..::   :..|:.:....|.|.     |.:||..
Mouse   869 KIKYKNVAQMLMRDRDFENSMKTWESKHTEIQAVQPPHLDFQESQDSLSDGEYAQMQHLARLAEN 933

  Fly  1189 LGQIEIESQCDL----EHV----------RNMLNTKFEESISYPKVSQDWCF-IDSCTAEHYFRI 1238
            |    |....||    :||          .|:||..|....|..:.....|. |::.:......:
Mouse   934 L----ISRLTDLSKVHQHVSVLMDSVNASANILNDVFYSQDSGNEAGAASCIPIETLSRTDAVDV 994

  Fly  1239 DRAQEHLHYICDIAIDELYILDHEAATMPQT------PDQERSFAA-------FSQRQAQNER-- 1288
            ..:.:.|:......:||..:.|.|...|.||      .:..|..|.       |.:.||.:.|  
Mouse   995 TFSLKGLYDDTKAFLDENLLRDAEDRAMLQTALDAMNTELRRILAIGWLSQIFFPEEQASDTRSL 1059

  Fly  1289 ------------RQMDQAQGRGPGST 1302
                        ::..:.:|..|.|:
Mouse  1060 SRRFRIKFPKLGKKKQREEGEKPKSS 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 14/52 (27%)
C1_1 661..725 CDD:278556 16/68 (24%)
LCB5 813..1140 CDD:224513 144/552 (26%)
DAGKc 814..942 CDD:214487 58/127 (46%)
DAGKa 969..1123 CDD:214486 64/161 (40%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
DgkkNP_808582.3 PH 59..147 CDD:278594 7/26 (27%)
PH_DGK_type2 60..154 CDD:270093 9/43 (21%)
C1 170..219 CDD:237996 14/53 (26%)
C1 242..292 CDD:237996 15/67 (22%)
DAGKc 336..458 CDD:214487 58/127 (46%)
DAGK_acc 703..860 CDD:295305 64/161 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846083
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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