DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and Dgkg

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:NP_037258.1 Gene:Dgkg / 25666 RGDID:2499 Length:788 Species:Rattus norvegicus


Alignment Length:828 Identity:239/828 - (28%)
Similarity:341/828 - (41%) Gaps:222/828 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 EPTGNSLENVSHEEVDNS---------NTKSS-VDTADSLDEASTMATCGSPGAAGGSGASSSHH 476
            |...:|..|||....:::         :|:|. :.|....:|....|..|.|.|.    ||||..
  Rat    93 EGASSSEPNVSDSNAESTAKADAACAPDTESKPIKTQVPSEELEAAAPWGEPNAP----ASSSDA 153

  Fly   477 NAFVVRDI--YLMVPDLKRDR-------------------AASVDSCFSKLSSNAKTEELQPS-- 518
            ....::|:  ||.:.:..|.:                   .|.:|...|::...|:..|..|:  
  Rat   154 PIVYLKDVVCYLSLMETGRPQDKLEFMFRLYDSDENELLDQAELDQIVSQMLHVAQYLEWDPTEL 218

  Fly   519 ------------------------ADGCFLTVPNINATRSRSVDIVLPTDEQARYKALSMTGSTV 559
                                    ..|...|:|.:         ::|..|:.|            
  Rat   219 RPILKEMLQGMDYNKDGFVSLEEWVSGGMTTIPLL---------VLLGMDDSA------------ 262

  Fly   560 TYADGRTASASNSRRPIRIVPDWTENAVQGEHYWKPTSASGDLCCLNEECIKSGQRMKCSACQLV 624
            :..|||.|              ||.     :|:.|||..  :.|.:....::. |.:.|..|:..
  Rat   263 SKGDGRHA--------------WTL-----KHFKKPTYC--NFCHIMLMGVRK-QGLCCIYCKYA 305

  Fly   625 AHHNCIPFVNEKSTLACKPTYRDVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKFFPMKQAVQSK 689
            .|..|:    ..|...|..||.    :..|......|.||... ...||.:|.|.....|:|   
  Rat   306 VHQRCV----SNSIPGCVKTYS----KAKRSGEVMQHAWVEGN-SSVKCDRCHKSIKCYQSV--- 358

  Fly   690 LFGSKEIVALACAWCHEIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSIRV 754
                   .|..|.||...:|.|      .::...|..|.....|:.|:.|..:            
  Rat   359 -------TARHCVWCRMTFHRK------CELSTACDGGELKDHILLPTSIYPV------------ 398

  Fly   755 SNKNNAASGSGGGGAGGGAGGGGGKSKKQTQRRQKGKEEK----KEPRAFIVKPIPSPEVIPVIV 815
                                         |:.||.||.:.    |.......|.||||...|::|
  Rat   399 -----------------------------TRDRQAGKSDSGAAAKGELVMQYKIIPSPGTHPLLV 434

  Fly   816 FINPKSGGNQGHKLLGKFQHLLNPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLSV 880
            .:||||||.||.::|.||.:||||:|||:|.:|||..||:.|:..|:.|||||||||||||:|..
  Rat   435 LVNPKSGGRQGERILQKFHYLLNPKQVFNLDKGGPTPGLNFFQDTPDFRVLACGGDGTVGWILDC 499

  Fly   881 LDQIQPPLQPAPAVGVLPLGTGNDLARALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRWRV 945
            :|:..  ....|.|.||||||||||||.|.|||     ||....:.|||:||..|..|::|||.:
  Rat   500 IDKAN--FTKHPPVAVLPLGTGNDLARCLRWGG-----GYEGGSLTKILKEIEQSPLVMLDRWYL 557

  Fly   946 KVTPNDDVTDDHVDRSKPNVPLNVINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQM 1010
            :|.|.::|      .:...||.|::|||||.||||.||..||..||.|||:||||::||::|.:.
  Rat   558 EVMPREEV------ENGDQVPYNIMNNYFSIGVDASIAHRFHVMREKHPEKFNSRMKNKLWYFEF 616

  Fly  1011 GGKDLILRQYRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPWNDS------FGA 1069
            |..:......:.|...:.|||||.:.  .|.:.....:..|||||..|||:.|.::      ...
  Rat   617 GTSETFAATCKKLHDHIELECDGVEV--DLSNIFLEGIAILNIPSMYGGTNLWGETKKNRAVIRE 679

  Fly  1070 SKPSI-------------DDGLMEVVGLT-TYQLPMLQAGMH--GTCICQCRKARIITKRTIPMQ 1118
            |:.|:             .|.|:|||||. ..::..:..|:.  |..:.||....|.||:.:|||
  Rat   680 SRKSVTDPKELKCCVQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVTIRTKKLLPMQ 744

  Fly  1119 VDGEACRVKPSVIEIELLNKALMLSKRKHGRGDVQVNPLEKMQLHILR 1166
            ||||.....|.:|:|...|:|.|:           :.|.:|.....||
  Rat   745 VDGEPWMQPPCMIKITHKNQAPMM-----------MGPPQKSSFFSLR 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 11/48 (23%)
C1_1 661..725 CDD:278556 15/63 (24%)
LCB5 813..1140 CDD:224513 147/348 (42%)
DAGKc 814..942 CDD:214487 69/127 (54%)
DAGKa 969..1123 CDD:214486 64/175 (37%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
DgkgNP_037258.1 DAG_kinase_N 5..172 CDD:291199 20/82 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..150 14/60 (23%)
EFh 176..245 CDD:238008 6/68 (9%)
EF-hand_7 177..241 CDD:290234 6/63 (10%)
C1 269..318 CDD:237996 14/74 (19%)
C1 333..380 CDD:197519 15/63 (24%)
LCB5 433..759 CDD:224513 145/340 (43%)
DAGKc 433..554 CDD:214487 69/127 (54%)
DAGKa 575..749 CDD:214486 64/175 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 768..788 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349564
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.