DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgA and Dgkb

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_006515130.1 Gene:Dgkb / 217480 MGIID:2442474 Length:803 Species:Mus musculus


Alignment Length:606 Identity:210/606 - (34%)
Similarity:293/606 - (48%) Gaps:107/606 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   584 ENAVQ--GEHYW------KPTSASGDLCCLNEECIKSGQRMKCSACQLVAHHNCIPFVNEKSTLA 640
            ||.|:  |:|.|      ||...:   .|||.......|.:.||.|:...|..|:    .::..:
Mouse   235 ENNVKDDGQHVWRLKHFNKPAYCN---LCLNMLIGVGKQGLCCSFCKYTVHERCV----ARAPPS 292

  Fly   641 CKPTYRDVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKFFPMKQAVQSKLFGSKEIVALACAWCH 705
            |..||    ::..:.....||:||...... ||.:|.|.....|.          :..|.|.||.
Mouse   293 CIKTY----VKSKKNTDVMHHYWVEGNCPT-KCDKCHKTVKCYQG----------LTGLHCVWCQ 342

  Fly   706 EIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWI--VKLPTKGNFKSSIRVSNKNNAASGSGGGG 768
            ...|||  |.:..|  .||..|.....|:||:.|  |.|.|..:..:|:....::.|.       
Mouse   343 TTLHNK--CASHLK--PECDCGPLKDHILPPTTICPVVLQTMPSAGASVPEERQSTAK------- 396

  Fly   769 AGGGAGGGGGKSKKQTQRRQKGKEEKKEPRA---------FIVKPIPSPEVIPVIVFINPKSGGN 824
                      |.|..:|:..|..::.|..||         ..:.|:|...  |::||:||||||.
Mouse   397 ----------KEKSSSQQPNKATDKNKMQRANSVTMDGQGLQITPVPGTH--PLLVFVNPKSGGK 449

  Fly   825 QGHKLLGKFQHLLNPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLSVLDQIQPPLQ 889
            ||.::..|||:|||||||:.|:..||..||..||..|:.|||||||||||||:|..:::..  :.
Mouse   450 QGERIYRKFQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKAN--VV 512

  Fly   890 PAPAVGVLPLGTGNDLARALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRWRVKVTPNDDVT 954
            ..|.|.:|||||||||||.|.|||     ||..|.:.|||::|..|..:::|||:.:|||||.  
Mouse   513 KHPPVAILPLGTGNDLARCLRWGG-----GYEGENLMKILKDIESSTEIMLDRWKFEVTPNDK-- 570

  Fly   955 DDHVDRSKPNVPLNVINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLILRQ 1019
                |.....||.::||||||.||||.||..||..||.|||:||||::||.:|.:.|..:.....
Mouse   571 ----DEKGDPVPYSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSAT 631

  Fly  1020 YRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPWNDS-----------FGASK-P 1072
            .:.|.:.|.:||||...  .|.:.....:..|||||..||::.|.:|           .|:.| |
Mouse   632 CKKLHESVEIECDGVQI--DLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKGSDKRP 694

  Fly  1073 SIDDG-------------LMEVVGLT-TYQLPMLQAGMH--GTCICQCRKARIITKRTIPMQVDG 1121
            ::.|.             |:|||||. ..::..:..|:.  |..:.||....|.|.:::|||:||
Mouse   695 TLTDAKELKFASQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVIRTSKSLPMQIDG 759

  Fly  1122 EACRVKPSVIEIELLNKALML 1142
            |.....|..|:|...|:|.||
Mouse   760 EPWMQTPCTIKITHKNQAPML 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 13/54 (24%)
C1_1 661..725 CDD:278556 18/63 (29%)
LCB5 813..1140 CDD:224513 147/354 (42%)
DAGKc 814..942 CDD:214487 67/127 (53%)
DAGKa 969..1123 CDD:214486 64/181 (35%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
DgkbXP_006515130.1 DAG_kinase_N 6..148 CDD:373103
EFh 152..221 CDD:238008
C1 244..293 CDD:237996 13/55 (24%)
C1_1 309..358 CDD:365894 18/63 (29%)
DAGKc 439..560 CDD:214487 67/127 (53%)
DAGKa 581..761 CDD:214486 64/181 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846098
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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