DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and DGKA

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_016874389.1 Gene:DGKA / 1606 HGNCID:2849 Length:891 Species:Homo sapiens


Alignment Length:590 Identity:201/590 - (34%)
Similarity:291/590 - (49%) Gaps:109/590 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 GEHYWKPTSASGDLCC-LNEECIKSG-QRMKCSACQLVAHHNCIPFVNEKSTLACK-PTY----R 646
            |:|.|:|......:.| |.|..|..| |.:.|:.|:...|..|     ....|.|: .||    :
Human   360 GQHMWRPKRFPRPVYCNLCESSIGLGKQGLSCNLCKYTVHDQC-----AMKALPCEVSTYAKSRK 419

  Fly   647 DVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKFFPMKQAVQSKLFGSKEIVALACAWCHEIYHNK 711
            |:|::.        |.||....|.|:|.:|          |.|:.....:..|.|.|||...|  
Human   420 DIGVQS--------HVWVRGGCESGRCDRC----------QKKIRIYHSLTGLHCVWCHLEIH-- 464

  Fly   712 EACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSIRVSNKNNAASGSGGGGAGGGAGGG 776
            :.|. || :|.||..|.....|:|||.|.         .|:..|                     
Human   465 DDCL-QA-VGHECDCGLLRDHILPPSSIY---------PSVLAS--------------------- 497

  Fly   777 GGKSKKQTQRRQKGKEEKKEPRAFIVKPIPSPEVIPVIVFINPKSGGNQGHKLLGKFQHLLNPRQ 841
             |..:|.::..||..::.....:..::..|.|...|::||:||||||.||.::|.|||::|||||
Human   498 -GPDRKNSKTSQKTMDDLNLSTSEALRIDPVPNTHPLLVFVNPKSGGKQGQRVLWKFQYILNPRQ 561

  Fly   842 VFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLSVLDQIQPPLQPAPAVGVLPLGTGNDLA 906
            ||:|.:.||::||.:|:..|:.|:|.|||||||||:|..:|:...|:  .|.|.|||||||||||
Human   562 VFNLLKDGPEIGLRLFKDVPDSRILVCGGDGTVGWILETIDKANLPV--LPPVAVLPLGTGNDLA 624

  Fly   907 RALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRWRVKVTPNDDVTDDHVDRSKPNVPLNVIN 971
            |.|.|||     ||..:.:.|||:::.||:.|.||||.|:|.|..  |:   ::|.| ||..:||
Human   625 RCLRWGG-----GYEGQNLAKILKDLEMSKVVHMDRWSVEVIPQQ--TE---EKSDP-VPFQIIN 678

  Fly   972 NYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLILRQYRNLSQWVTLECDGQDF 1036
            ||||.||||.||..||..||.:||:||||::||::|.:....:.|....:.|.:.:|:|..|:..
Human   679 NYFSIGVDASIAHRFHIMREKYPEKFNSRMKNKLWYFEFATSESIFSTCKKLEESLTVEICGKPL 743

  Fly  1037 TGKLRDAGCHAVLFLNIPSYGGGTHPW-------------NDSFGASK-------------PSID 1075
              .|.:.....:..|||||..||::.|             |.:.||:.             |.:.
Human   744 --DLSNLSLEGIAVLNIPSMHGGSNLWGDTRRPHGDIYGINQALGATAKVITDPDILKTCVPDLS 806

  Fly  1076 DGLMEVVGLT-TYQLPMLQAGMH--GTCICQCRKARIITKRTIPMQVDGEACRVKPSVIEIELLN 1137
            |..:|||||. ..::..:...:.  |..:.:|.:....|.:|:|||:|||.....|..|:|...|
Human   807 DKRLEVVGLEGAIEMGQIYTKLKNAGRRLAKCSEITFHTTKTLPMQIDGEPWMQTPCTIKITHKN 871

  Fly  1138 KALML 1142
            :..||
Human   872 QMPML 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 13/50 (26%)
C1_1 661..725 CDD:278556 20/63 (32%)
LCB5 813..1140 CDD:224513 143/355 (40%)
DAGKc 814..942 CDD:214487 69/127 (54%)
DAGKa 969..1123 CDD:214486 58/182 (32%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
DGKAXP_016874389.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.