DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and dgkz

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_004913437.1 Gene:dgkz / 100496839 XenbaseID:XB-GENE-1011474 Length:1105 Species:Xenopus tropicalis


Alignment Length:1153 Identity:434/1153 - (37%)
Similarity:605/1153 - (52%) Gaps:133/1153 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 SPPISPCSSNSGRLPALAPIISTPCSSADADDAGAAMGLPVRARRRSISRQEAIFVEPTGNSLEN 430
            |.|..||.:.:   |....::.|...:.....||.........||.||:.     |:|...||..
 Frog    15 SAPAEPCLAPT---PRRCSVVVTTGKARRRSSAGQPSSSLAMQRRTSINP-----VQPVPISLGA 71

  Fly   431 VSHEEVDNSNTKSSVDTADSLDEASTMATCGSPGAAGGSGASSSHHNAFVVRDIYLMVPDLKRDR 495
            .|.....|...:||..|...           ||..|.........|..    |..|:.|.:....
 Frog    72 PSRIAKRNGRRRSSTTTPRL-----------SPRFAVQKKRGGRLHTI----DQQLIGPSMLLAS 121

  Fly   496 AASVDSCFSKLSSNAKTEELQPSADGCF----LTVPNINATRS-RSVDIVLPTDEQARYKALSMT 555
            ...:.....|...:::.|||..::|...    |...::.||.| ..:::...:.:....||::.:
 Frog   122 LIPIKKDSGKKRESSEDEELIDTSDEGVDQENLIPRDVGATSSGNGLNLEPCSIDHQNLKAIAKS 186

  Fly   556 GSTVTYADGRTASA--SNSRRPIRIVPDWTENAVQGEHYWKPTSASGDLCCLNEE-CI---KSGQ 614
            |:....|   |.|.  |.....:|...|||:.||.|:|.|..|:.|||.|.|.|: |.   ||..
 Frog   187 GAQHLVA---TPSVLPSEPDTQVRNTVDWTDAAVYGDHLWFETNVSGDFCYLGEQNCTSKQKSAS 248

  Fly   615 RMKCSACQLVAHHNCIPFVNEKSTLACKPTYRDVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKF 679
            |.||:||::|.|..||..: ||....|||::|:.|.|..||.....||||||:.:.|||:||||.
 Frog   249 RRKCAACKIVVHTPCIEQL-EKINFRCKPSFRESGSRNIREPVIVRHHWVHRRRQAGKCRQCGKG 312

  Fly   680 FPMKQAVQSKLFGSKEIVALACAWCHEIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPT 744
            |..|.|     |.||||||::|:||.:.||:|.:||....|.|.|.||.:|.:||||:||:::..
 Frog   313 FQQKFA-----FHSKEIVAISCSWCKQAYHSKVSCFMFHHIEEPCSLGVHAAVIVPPTWIIRVRR 372

  Fly   745 KGNFKSSIRVSNKNNAASGSGGGGAGGGAGGGGGKSKKQTQRRQKGKEEKKEP--RAFIVKPIPS 807
            .   :||::.|.                      |.|:.:.:|:..|:..:||  |.||::|.|.
 Frog   373 P---QSSLKSSK----------------------KKKRPSFKRKLSKKASEEPRQRPFIIRPAPC 412

  Fly   808 PEVIPVIVFINPKSGGNQGHKLLGKFQHLLNPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDG 872
            |.:.||:||:|||||||||.|:|..|...|||||||||:|||||..|:|:||.|:||:|||||||
 Frog   413 PLMKPVLVFVNPKSGGNQGVKILQSFMWYLNPRQVFDLSQGGPKEALEMYRKVPSLRILACGGDG 477

  Fly   873 TVGWVLSVLDQIQPPLQPAPAVGVLPLGTGNDLARALGWGGSIFFQGYTDEPIGKILREIGMSQC 937
            ||||:||.|||::  |.|.|.|.:|||||||||||.|.|||     ||||||:.|||..:.....
 Frog   478 TVGWILSALDQLR--LFPPPPVAILPLGTGNDLARTLNWGG-----GYTDEPLSKILSHVEEGIV 535

  Fly   938 VLMDRWRVKVTPNDDV-TDDHVDRSKPNVPLNVINNYFSFGVDAHIALEFHEAREAHPERFNSRL 1001
            |.:|||.:.|..|.:. .||..|.:...:||:|.|||||.|.|||:.|||||:|||:||:||||.
 Frog   536 VQLDRWNLVVERNPEAWEDDKGDGATDKLPLDVFNNYFSLGFDAHVTLEFHESREANPEKFNSRF 600

  Fly  1002 RNKMYYGQMGGKDLILRQYRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPWND- 1065
            ||||:|......|......|:|::.:.:.|||.|.|.|::|.....::|||||.|..||.||.: 
 Frog   601 RNKMFYAGTAVSDFFTGSSRDLAKHIRVVCDGVDLTAKIQDLKLQCLVFLNIPRYCAGTMPWGNP 665

  Fly  1066 ----SFGASKPSIDDGLMEVVGLTTYQLPMLQAGMHGTCICQCRKARIITKRTIPMQVDGEACRV 1126
                .|...:.  |||.:||:|.|...|..||.|.||..:.|||:..:.|.::||||||||.|::
 Frog   666 GEHHDFEPQRH--DDGCIEVIGFTMASLAALQVGGHGERLHQCREVLLTTSKSIPMQVDGEPCKL 728

  Fly  1127 KPSVIEIELLNKALMLSKRKHGR-----GDVQVNPLEKMQLHILRVTMQQYEQYHYDKEMLRKLA 1186
            .||||:|.|.|:|.::.|.|...     .|.|..| ::::|.:.|::|..||..|||||.||:.:
 Frog   729 GPSVIKISLRNQANLVQKTKRRTSVPLLNDQQPVP-DRLRLRVNRISMHDYEALHYDKEKLREAS 792

  Fly  1187 NKLGQIEIESQCDLEHVRNMLNTKFEESISYP----------------------KVSQDWCFIDS 1229
            ..||.|.:....|||..|..:....|:..:||                      |:|..|||:||
 Frog   793 LPLGVIVVPGDSDLETCRTHIERLQEDFPAYPTILQRLDLKEDGTARPQTVSSQKLSPKWCFLDS 857

  Fly  1230 CTAEHYFRIDRAQEHLHYICDIAIDELYILDHE------AATMPQTPDQERSFAAFSQRQAQNER 1288
            .||:.::|||||||||:::.:|..||||:||.|      ..|.|...|.....|:.:.|..|...
 Frog   858 TTADRFYRIDRAQEHLNFVLEICQDELYVLDPELIITQSVGTSPALLDTSDKAASPNNRLFQFPP 922

  Fly  1289 RQM--------DQAQGRGPGSTDEDLQIGSKPI-KVMKWKSPILEQTSDAILL-AAQSGDLNMLR 1343
            ..:        |.:| |...::|..|   :||: ...:.:....|..|:.||| |:::|||...|
 Frog   923 PPISPPLTGSPDGSQ-RSRSASDTFL---TKPVCSHNRMEEGFSESQSNEILLEASKNGDLERFR 983

  Fly  1344 ALHEQGYSLQSVNKNGQTALHFACKYNHRDIVKYIIASATRRLINMADKELGQTALHIAAEQNRR 1408
            ..|..|.:|...:..|.|.||.|.....::||||||..|...::::|:.:.|:|.||:||...:|
 Frog   984 EAHRAGGTLTLRDAQGCTLLHHAVTSGSKEIVKYIIEHAPAEILDVAELKRGETCLHLAASFRQR 1048

  Fly  1409 DICVMLVAAGAHLDTLDSGGNTPMMVAFNKNANEIATYLESKQGTQPV 1456
            .||..:|.|||.|...|..|:||...|......|:|.|||::|..|.:
 Frog  1049 TICHYIVEAGASLMKTDLQGDTPKNKAEKAKDLELAAYLENRQHYQMI 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 23/52 (44%)
C1_1 661..725 CDD:278556 33/63 (52%)
LCB5 813..1140 CDD:224513 174/332 (52%)
DAGKc 814..942 CDD:214487 80/127 (63%)
DAGKa 969..1123 CDD:214486 74/158 (47%)
ANK 1329..1447 CDD:238125 45/118 (38%)
ANK repeat 1329..1356 CDD:293786 11/27 (41%)
Ank_2 1330..1425 CDD:289560 38/95 (40%)
ANK repeat 1358..1391 CDD:293786 12/32 (38%)
ANK repeat 1393..1425 CDD:293786 14/31 (45%)
Ank_2 1399..>1459 CDD:289560 24/58 (41%)
dgkzXP_004913437.1 C1_1 294..351 CDD:365894 32/61 (52%)
DAGKc 419..540 CDD:214487 80/127 (63%)
DAGKa 568..725 CDD:214486 74/158 (47%)
Ank_2 970..1065 CDD:372319 37/94 (39%)
ANK repeat 970..996 CDD:293786 10/25 (40%)
ANK repeat 998..1028 CDD:293786 12/29 (41%)
ANK repeat 1034..1059 CDD:293786 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3594
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37831
Inparanoid 1 1.050 679 1.000 Inparanoid score I713
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143806at33208
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 1 1.000 - - otm47575
Panther 1 1.100 - - O PTHR11255
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1934
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.070

Return to query results.
Submit another query.