DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and dgki

DIOPT Version :10

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_031754398.1 Gene:dgki / 100491416 XenbaseID:XB-GENE-996218 Length:1095 Species:Xenopus tropicalis


Alignment Length:1089 Identity:411/1089 - (37%)
Similarity:559/1089 - (51%) Gaps:227/1089 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 GAAGGSGASSSHHNAFVVRDIYLMVPDLKRDRAASVDSCFSKLSSNAKTEELQPSADGCFLTVPN 528
            ||..|||:|||                     |:|.||...|..|.:..:.|.|:  .|    |.
 Frog   125 GAGEGSGSSSS---------------------ASSSDSESGKAISRSGLQHLAPA--HC----PV 162

  Fly   529 INATRSRSVDIVLPTDEQARYKALSMTGSTVTYADGRTASASNSRRPIRIVPDWTENAVQGEHYW 593
            .|.          |..|                              :|:..||||||:.|||.|
 Frog   163 SNG----------PAKE------------------------------LRMTLDWTENAINGEHLW 187

  Fly   594 KPTSASGDLCCLNEE-C----IKSGQRMKCSACQLVAHHNCIPFVNEKSTLACKPTYRDVGIRQY 653
            :.|:.|||||.|.|| |    .||..|.||:||::|.|..|:..: :|....||||:||...|..
 Frog   188 QETNVSGDLCYLGEENCQVKFAKSAIRRKCAACKIVVHTACMEQL-DKINFRCKPTFRDGTSRTP 251

  Fly   654 RE----------QTTTHHHWVHRKLEKGKCKQCGKFFPMKQAVQSKLFGSKEIVALACAWCHEIY 708
            ||          |....||||||:.::||||||||.|..|.:     |.||||||::|:||.:.:
 Frog   252 REVRHFSCCSNQQNLVRHHWVHRRRQEGKCKQCGKGFQQKFS-----FHSKEIVAISCSWCKQAF 311

  Fly   709 HNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSIRVSNKNNAASGSGGGGAGGGA 773
            |||..||....|.|.|.||.:|.:|||||||:|:       ...:|:.||:.             
 Frog   312 HNKVTCFLLHHIEEPCSLGAHAAVIVPPSWIIKV-------KKPQVNTKNST------------- 356

  Fly   774 GGGGGKSKKQT--QRR--QKGKEEKKEPRAFIVKPIPSPEVIPVIVFINPKSGGNQGHKLLGKFQ 834
                 :.||:|  :||  :||.|:.| .||||:|||.||.:.|::||:|||||||||.|:|..|.
 Frog   357 -----RRKKRTSFKRRASKKGLEDIK-GRAFIIKPISSPLMKPLLVFVNPKSGGNQGTKVLQMFM 415

  Fly   835 HLLNPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLSVLDQIQPPLQPAPAVGVLPL 899
            ..|||||||||:|.||:..|:|:||.||||:|||||||||||:|||||::|  |.|.|.|.||||
 Frog   416 WYLNPRQVFDLSQEGPRGALEMYRKVPNLRILACGGDGTVGWILSVLDELQ--LNPQPPVAVLPL 478

  Fly   900 GTGNDLARALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRWRVKVTPNDDVTDDHVDRSKPN 964
            ||||||||.|.|||     ||||||:.|||..:.....|.:|||.:.|..|.|:..:.:|.....
 Frog   479 GTGNDLARTLNWGG-----GYTDEPVSKILCHVEDGTNVQLDRWNLHVERNPDLLHEELDDGTHK 538

  Fly   965 VPLNVINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLILRQYRNLSQWVTL 1029
            :||||.|||||.|.|||:.|||||:|||:||:||||.||||:|......|.:.|..|:||:.|.:
 Frog   539 LPLNVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGAAFSDFLQRSSRDLSKHVKV 603

  Fly  1030 ECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPW---NDSFGASKPSIDDGLMEVVGLTTYQLPM 1091
            .|||.|.|.|:::.....::|||||.|..||.||   :|.........|||.:||:|.|...|..
 Frog   604 VCDGTDLTPKIQELKFQCIVFLNIPRYCAGTMPWGNPSDHRDFEPQRHDDGYIEVIGFTMASLAA 668

  Fly  1092 LQAGMHGTCICQCRKARIITKRTIPMQVDGEACRVKPSVIEIELLNKALMLSKRKHGRGDVQVNP 1156
            ||.|.||..:.|||:..::|.:.||||||||.||:.||:|.|.|.|:|.|:.|.|.......:|.
 Frog   669 LQVGGHGERLHQCREVTLLTYKAIPMQVDGEPCRLAPSLIRISLRNQANMVQKSKRRTSMPLLND 733

  Fly  1157 LEK-------------------------MQLHILRVTMQQYEQYHYDKEMLRKLANKLGQIEIES 1196
            |.|                         :::.:.|:.:|:||..||:|:.||..:..||.|.:..
 Frog   734 LHKVHSADHRRVSAPPDSFSVPHSVPDRLRIRVNRIRLQEYEGLHYEKDKLRDASIPLGIIVVRG 798

  Fly  1197 QCDLEHVRNML--------------------NTKFEESISYPKVSQDWCFIDSCTAEHYFRIDRA 1241
            .||||..|..:                    ::.|...:|..:::..|||:|:.:|:.::||||:
 Frog   799 DCDLETCRMYIDRLQEDLHSVTPHRDHCQDHDSSFPRLLSAQRLNPRWCFLDATSADRFYRIDRS 863

  Fly  1242 QEHLHYICDIAIDELYILDHEAATMPQ----------------------TPDQERSFAAFS---- 1280
            |||||::.:|:.||::|||.||...||                      ||...:...:.|    
 Frog   864 QEHLHFVTEISQDEIFILDPEADGTPQGSTGMGMPDLVVEQPSGPSEWWTPTSRKRIVSDSCVAG 928

  Fly  1281 ----QRQAQNERRQMDQAQGR-GPGSTDEDLQIGSKPIKVMKWKSPILEQTSDAILLAAQSGDLN 1340
                |.:..::...:.....| .|.|.||                       .|:..|..:|||.
 Frog   929 RMSLQYEISDKVHDLSPCSARLSPVSVDE-----------------------QALTEAVAAGDLA 970

  Fly  1341 MLRALHEQGYSLQSVNKNGQTALHFACKYNHRDIVKYIIASATRRLINMADKELGQTALHIAAEQ 1405
            .:....::|.||:.......:.||.|.:..|.|||.||:.:....|::|:|:..|:||||.||..
 Frog   971 KVTECCKKGMSLRIPGPERGSLLHLAARAGHSDIVAYILQNGPTDLLDMSDRATGETALHKAASH 1035

  Fly  1406 NRRDICVMLVAAGAHLDTLDSGGNTPMMVAFNKNANEIATYLESKQGTQ 1454
            ..|.:|.:||.|||.:...|:.||||...|.....:|:|:||::.|..|
 Frog  1036 GHRRVCQILVDAGACVIKKDAKGNTPFDKAQEAGDSELASYLDTCQAKQ 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_DGK_typeIV_rpt1 586..647 CDD:410352 30/65 (46%)
C1_DGK_typeIV_rpt2 661..727 CDD:410405 34/65 (52%)
DAGKc 814..942 CDD:214487 81/127 (64%)
DAGKa 969..1123 CDD:214486 76/156 (49%)
ANKYR <1329..1452 CDD:440430 44/122 (36%)
ANK repeat 1329..1356 CDD:293786 8/26 (31%)
ANK repeat 1358..1391 CDD:293786 11/32 (34%)
ANK repeat 1393..1425 CDD:293786 14/31 (45%)
dgkiXP_031754398.1 C1_DGKiota_rpt1 175..247 CDD:410400 37/72 (51%)
C1_DGKiota_rpt2 267..341 CDD:410446 41/78 (53%)
DAGKc 395..516 CDD:214487 81/127 (64%)
DAGKa 543..700 CDD:214486 76/156 (49%)
ANKYR <959..1094 CDD:440430 46/126 (37%)
ANK repeat 959..986 CDD:293786 8/26 (31%)
ANK repeat 991..1021 CDD:293786 11/29 (38%)
ANK repeat 1023..1055 CDD:293786 14/31 (45%)

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