DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgA and dgke

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_002937855.1 Gene:dgke / 100489119 XenbaseID:XB-GENE-990685 Length:554 Species:Xenopus tropicalis


Alignment Length:569 Identity:187/569 - (32%)
Similarity:270/569 - (47%) Gaps:104/569 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 GEHYWKPTSASG--DLCCLNEECIKSGQRMKCSACQLVAHHNCIPFVNEKSTLACKPTYRDVGIR 651
            |:|.|:.|...|  ..|.:..:.|..|  :.|.:|.|.|...|:...|.:  ..||.      |.
 Frog    43 GKHGWQDTDLFGKPTYCSVCGQHILHG--VYCRSCGLCADEACVRRANRR--FPCKE------II 97

  Fly   652 QYREQTTTHHHWVHRKLEK-GKCKQCGKFFPMKQAVQSKLFGSKEIVALACAWCHEIYHNKEACF 715
            .:.|  ...||||...:.. ..|..||:    :...|.||...:      |.||....|: :...
 Frog    98 LWAE--GRGHHWVRGNVPLCSLCSVCGQ----QCGCQPKLCDYR------CIWCQRTVHD-DCMQ 149

  Fly   716 NQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSIRVSNKNNAASGSGGGGAGGGAGGGGGKS 780
            |..|| |:|..|.:..:|:|||::          |::                            
 Frog   150 NNLKI-EDCDFGEFKNLIIPPSYL----------SAV---------------------------- 175

  Fly   781 KKQTQRRQKGKEEKKEPRAFIVKPIPSPEVIPVIVFINPKSGGNQGHKLLGKFQHLLNPRQVFDL 845
               ||.: |||....|..|..:    ..:..|:||..|.:||.|.|..||.:|:.||||.|||||
 Frog   176 ---TQLK-KGKTTDYEKLASSM----GKQWTPLIVLANTRSGNNMGEALLSEFKGLLNPIQVFDL 232

  Fly   846 TQGGPKMGLDMFRKAP--NLRVLACGGDGTVGWVLSVLDQIQ-PPLQP-APAVGVLPLGTGNDLA 906
            ::..|...|.:....|  :.:||.|||||||||||..:|::: ..|:. .|.|.|||||||||||
 Frog   233 SKVSPFKALQLCTLLPDKSAKVLVCGGDGTVGWVLDAVDEMKIKGLEGCVPQVAVLPLGTGNDLA 297

  Fly   907 RALGWGGSIFFQGYT-DEPIGKILREIGMSQCVLMDRWRVKVTPNDDVTDDHVDRSKPNVPLNVI 970
            ..||||.     ||. |.|:.:|||.|..:..:.:|||:|:      ||:......||.| |: :
 Frog   298 NTLGWGA-----GYAGDVPVEQILRNIMDADGIKLDRWKVQ------VTNKGYSLRKPKV-LS-M 349

  Fly   971 NNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLILRQYRNLSQWVTLECDGQD 1035
            |||||.|.||.:||.||..||..|..|:|||.||..|...|.||.::::.::|::.|.||.||: 
 Frog   350 NNYFSVGPDALMALNFHTHREKTPSLFSSRLVNKAVYLFYGTKDCLVQECKDLNKKVELELDGE- 413

  Fly  1036 FTGKLRDAGCHAVLFLNIPSYGGGTHPW----NDSFGASKPSIDDGLMEVVGL-TTYQLPMLQAG 1095
               ::.......::.|||..:|||...|    ::.:..|:.  ||||:||||: .::....:|..
 Frog   414 ---RIDLPNLEGIVVLNIGYWGGGCRLWEGMGDEPYPLSRH--DDGLLEVVGVYGSFHCAQIQVK 473

  Fly  1096 M-HGTCICQCRKARIITKRT-IPMQVDGEACRVKPSVIEIELLNKALML 1142
            : :...:.|....|::.|.: :|||||||.....|..:.|.....||||
 Frog   474 LANPVRLGQAHTVRLLLKSSKMPMQVDGEPWAQGPCTVTITHKTHALML 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 13/50 (26%)
C1_1 661..725 CDD:278556 18/64 (28%)
LCB5 813..1140 CDD:224513 132/338 (39%)
DAGKc 814..942 CDD:214487 62/132 (47%)
DAGKa 969..1123 CDD:214486 57/160 (36%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
dgkeXP_002937855.1 C1 45..88 CDD:381770 12/44 (27%)
C1 105..148 CDD:237996 14/53 (26%)
DAGKc 201..329 CDD:214487 62/132 (47%)
DAGKa 349..503 CDD:214486 57/159 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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