DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgA and dgke

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:NP_001165699.1 Gene:dgke / 100150463 ZFINID:ZDB-GENE-090512-7 Length:564 Species:Danio rerio


Alignment Length:595 Identity:187/595 - (31%)
Similarity:270/595 - (45%) Gaps:123/595 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   573 RRPIRIV--PDWTENAVQGEHYW----KPTSASGDLCCLNEECIKSGQRMKCSACQLVAHHNCIP 631
            :||.|.:  .|....:..|.||.    |||     .||:..:.|..|  ..|..|.:.:...||.
Zfish    35 QRPKRKIQLKDLFRKSKHGWHYTDLFNKPT-----YCCVCCQPILQG--AFCDCCGICSDEQCIQ 92

  Fly   632 FVNEKSTLACKPTYRDVGIRQYREQTTTH----HHWVHRKLEK----GKCK-QCGKFFPMKQAVQ 687
            ..:.  .|:||         :...|..|.    |.||...:..    |.|| |||        .|
Zfish    93 RADR--ILSCK---------EIMTQNQTDGKFCHQWVKGNVPLASYCGVCKQQCG--------TQ 138

  Fly   688 SKLFGSKEIVALACAWCHEIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFKSSI 752
            .||...:      |.||....|  :.|.: :...:.|.||.:..:|:||.::.::          
Zfish   139 PKLCDYR------CVWCQTTVH--DDCLS-SLTDDLCDLGEFHSVIIPPCYLYQV---------- 184

  Fly   753 RVSNKNNAASGSGGGGAGGGAGGGGGKSKKQTQRRQKGKEEKKEPRAFIVKPIPSPEVIPVIVFI 817
               ||                           .||:...|..|      :..:......||:|..
Zfish   185 ---NK---------------------------LRRRHPDEYSK------LAAVYGSGWTPVLVLA 213

  Fly   818 NPKSGGNQGHKLLGKFQHLLNPRQVFDLTQGGPKMGLDMFRKAP--NLRVLACGGDGTVGWVLSV 880
            |.:||.|.|..|||:|:.||||.|||||::..|...|.:....|  ::|||.|||||||||||..
Zfish   214 NTRSGNNMGEILLGEFRTLLNPVQVFDLSELPPSKALQLCTLLPPGSVRVLVCGGDGTVGWVLDA 278

  Fly   881 LD--QIQPPLQPAPAVGVLPLGTGNDLARALGWGGSIFFQGYTDE-PIGKILREIGMSQCVLMDR 942
            :|  :::...|..|.|.:|||||||||:.:||||.     ||..| |:.::||.:..::.|.|||
Zfish   279 IDTMKLKGQDQFIPLVTILPLGTGNDLSNSLGWGA-----GYAGEIPVEQVLRNVLEAEVVKMDR 338

  Fly   943 WRVKVTPNDDVTDDHVDRSKPNVPLNVINNYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYY 1007
            |:|:|....:..      .||.| |: :|||||.|.||.:||.||..||..|..|:||:.||..|
Zfish   339 WKVQVASKGNYF------RKPKV-LS-MNNYFSVGPDALMALNFHVHREKTPSFFSSRIINKAVY 395

  Fly  1008 GQMGGKDLILRQYRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIPSYGGGTHPWNDSFGASKP 1072
            ...|.||.::::.::|.:.:.||.||:..|    ......::..||.::|||...|........|
Zfish   396 FLYGTKDCLVQECKDLDKRIELELDGEQVT----LPNLEGIIVCNIGNWGGGCRLWEGMGDEPYP 456

  Fly  1073 --SIDDGLMEVVGL-TTYQLPMLQAGM-HGTCICQCRKARIITKRT-IPMQVDGEACRVKPSVIE 1132
              .:||||:||||: .::....:|..: :...:.|....|::.|.: :|||||||.....|..|.
Zfish   457 PTRVDDGLLEVVGVYGSFHCAQIQVKLANPVRLGQAHTVRLVLKSSRMPMQVDGEPWAQGPCTIT 521

  Fly  1133 IELLNKALML 1142
            |....:||||
Zfish   522 ITHKTQALML 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 13/52 (25%)
C1_1 661..725 CDD:278556 17/68 (25%)
LCB5 813..1140 CDD:224513 130/336 (39%)
DAGKc 814..942 CDD:214487 61/132 (46%)
DAGKa 969..1123 CDD:214486 55/158 (35%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
dgkeNP_001165699.1 C1 55..91 CDD:294036 11/42 (26%)
C1 115..164 CDD:197519 17/65 (26%)
DAGKc 210..338 CDD:214487 61/132 (46%)
DAGK_acc 358..512 CDD:295305 55/157 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590836
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000241
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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