DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdgA and dgkh

DIOPT Version :9

Sequence 1:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_021334551.1 Gene:dgkh / 100137124 ZFINID:ZDB-GENE-070912-328 Length:1329 Species:Danio rerio


Alignment Length:1487 Identity:308/1487 - (20%)
Similarity:465/1487 - (31%) Gaps:636/1487 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 PSPPHLPLDPGSPPISPCSSNSGRLPALAPI-ISTPCSSADADDAGAAMGLPVRARRRSISRQEA 418
            |:|......|..|..:..|::.  :||:..: .|.|.....:|..|...|.....|:.|.|.|  
Zfish    28 PNPECCDFPPQEPEKAAASASG--VPAVGAVGGSGPVVDESSDSEGEQEGPQKLIRKVSTSGQ-- 88

  Fly   419 IFVEPTGNSLENVSHEEVDNSNTKSSVDTADSLDEASTMAT--------------CGSPGAAGGS 469
                                ..:|:||.....|.:.|:...              ......|||.
Zfish    89 --------------------IRSKTSVKEGLLLKQTSSFQRWKKRYFKLRGRTLYYAKDAKAGGV 133

  Fly   470 GASSSHHNAFVVRDIYLMVPDLKRDRAASVDSCFSKLSSNAKTEELQPSADGCFLTVPNINATRS 534
            .|...:.              :.|.|.     |:..||.........|.|.|...:...:.|.||
Zfish   134 LARWQYR--------------VSRSRV-----CWRVLSVCWTGARRPPPALGASGSEEGLVAIRS 179

  Fly   535 RSVDIVLPTDEQARYKALSMTGSTVTYADGRTASASNS-------RRPI------RIVPDWTEN- 585
            ...|.|..:|              .:.|:..|.:.:||       ||.|      :.:.||..: 
Zfish   180 LIFDEVDLSD--------------ASVAESSTKNINNSFTVITPFRRLILCAENRKEMEDWISSL 230

  Fly   586 -AVQG-EHY---------------W------KPTSASGDLCCLNEECIKSGQRMKCSACQLVAHH 627
             :||. |||               |      :||..:   .|.:.....:...:.|..|:..||.
Zfish   231 KSVQSREHYETAQFNVEHFSGMHNWYACSHARPTFCN---VCRDSLSGVTSHGLSCEVCKFKAHK 292

  Fly   628 NCIPFVNEKSTLACK-PTYRDVG--IRQYREQTTTHHHWVHRKLE-KGKC----KQCGKFFPMKQ 684
            .|.    .::|..|| .|...:|  |.:..:.....|.|:...|. ..||    |.||....::.
Zfish   293 RCA----VRATNNCKWTTLASIGKDIIEDEDGIAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQD 353

  Fly   685 AVQSKLFGSKEIVALACAWCHEIYHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNFK 749
                          ..|.||..:.|.  ||.:  ....:|.||.....|:||:.:..:.:.|.:|
Zfish   354 --------------WRCLWCKAMVHT--ACMD--LYPRKCPLGQCKVSIIPPTALNSIDSDGFWK 400

  Fly   750 SSIRVSNKNNAASGSGGGGAGGGAGGGGGKSKKQTQRRQKGKEEKKEPRAFIVKPIPSPEVIPVI 814
            ::                                                     .|.....|::
Zfish   401 AT-----------------------------------------------------CPPSCASPLL 412

  Fly   815 VFINPKSGGNQGHKLLGKFQHLLNPRQVFDLTQGGPKMGLDMFRKAPNLRVLACGGDGTVGWVLS 879
            ||:|.|||.|||.|.|.:|:.||||.|||||..|||.:||.:|:|..|.|:|.|||||:||||||
Zfish   413 VFVNSKSGDNQGVKFLRRFKQLLNPAQVFDLVNGGPHLGLRLFQKFDNFRILVCGGDGSVGWVLS 477

  Fly   880 VLDQIQPPLQPAPAVGVLPLGTGNDLARALGWGGSIFFQGYTDEPIGKILREIGMSQCVLMDRW- 943
            .:|::.  |.....:|||||||||||||.||||.|.    ..|..:.:||.::..:...::||| 
Zfish   478 EIDKLN--LHKQCQLGVLPLGTGNDLARVLGWGPSC----DDDTQLPQILEKLERASTKMLDRWS 536

  Fly   944 ----RVKVTP---------------------NDDV---------TDDH----------------- 957
                .:|:.|                     .|.|         :|.|                 
Zfish   537 IMTYEIKIPPKHSCPATPEEAEDGQLQISAYEDSVAAHLTKILNSDQHSVVISSSKVLCETVKEF 601

  Fly   958 ----------------------------------------------------------------- 957
                                                                             
Zfish   602 VSRVGKCYERGSDSSEESDALALKCAMLNEKLESLLQTLNLEAQVLSPTALTTPPIVEEEVEEEE 666

  Fly   958 ---------------------------------------------------------VDR----- 960
                                                                     ||.     
Zfish   667 LEEEDEDLSEESLTELKENETEKGSAHKLFRPREQLVLRANSLKKALRQIIEQAERMVDEQNAHT 731

  Fly   961 ----------------------------------------------------------------- 960
                                                                             
Zfish   732 EEQELQSPSDFRKDSEEENKDNEKDEDTKELETLPLAKSPCSPPERRISRSTQSCGSFSITPFTT 796

  Fly   961 SKPNVP-LN-----------------------------------------------------VIN 971
            ||.|:| ||                                                     |:|
Zfish   797 SKENLPVLNTRIICPGLRAGLAASIAGSSIISKMLLANIDPFGATPFIDPDLDSLEGYLEKCVMN 861

  Fly   972 NYFSFGVDAHIALEFHEAREAHPERFNSRLRNKMYYGQMGGKDLILRQYRNLSQWVTLECDGQDF 1036
            |||..|:||.|:|||:..||.|||:..||.:|.|:||.:|.|:|:.|.|:||.|.|.||||||  
Zfish   862 NYFGIGLDAKISLEFNNKREEHPEKCRSRTKNMMWYGVLGTKELLQRTYKNLEQKVQLECDGQ-- 924

  Fly  1037 TGKLRDAGCHAVLFLNIPSYGGGTHPW-----NDSFGASKPSIDDGLMEVVGL-TTYQLP---ML 1092
              .:.......:..||||||.|||:.|     :|.|.|  ||.||.::|||.: .:.|:.   ::
Zfish   925 --YIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDIFCA--PSFDDKILEVVAVFGSMQMAVSRVI 985

  Fly  1093 QAGMHGTCICQCRKARIITKRTIPMQVDGEACRVKPSVIEIELLNKALMLSKRKHGRGDVQVNPL 1157
            :...|....|:..|..|:....:|:||||||......||:|:..|:|.||::.:           
Zfish   986 KLQHHRIAQCRTVKITILGDEGVPVQVDGEAWIQPAGVIKIQHKNRAQMLTRDR----------- 1039

  Fly  1158 EKMQLHILRVTMQQYE-QYHYDKEMLRKLANKLGQIEIESQCDLEHVRNMLNTKFEESISYPKVS 1221
                  ....|::.:| :..|||..||                 .|:             ||:.|
Zfish  1040 ------AFENTLKSWEDKLKYDKPPLR-----------------PHL-------------YPQQS 1068

  Fly  1222 QDWCFIDSCTAEHYFRIDRAQEHLHYICDIAIDELYILDHEAATMPQTPDQERSFAAFSQRQAQN 1286
                 :|..|.|        :..|..:|..|.::|.....|||...|..:||.:.|..:...|.|
Zfish  1069 -----VDLATEE--------EATLIQMCARAAEDLITRICEAAKNYQLLEQELAHAVNASSHAIN 1120

  Fly  1287 ERR-QMDQAQGRGPG-----------STDEDLQIGSKPIKVMKWKSPILEQTSDAILLAAQSGDL 1339
            :.. :..::..|...           :..|.|.:|..|:::    .|..|   |.:..|.|:.::
Zfish  1121 KTHPKFPESLTRNTAIEVASTVKALHNETESLLVGRVPLQL----DPPHE---DLLSTALQNVEV 1178

  Fly  1340 ------------NMLRALHEQGYSLQSVNKNGQTALHFACKYNHRDIVKYIIASATRRLINMADK 1392
                        ::|:...|:..||:...:|.::.:       .|.:.|:......::....:|.
Zfish  1179 ELGKLVEIPWLYHILQPNDEEDPSLEYGKRNSRSGM-------FRIVPKFKKEKVPKKSSPQSDD 1236

  Fly  1393 ELGQTALHIAAEQNRRDICVMLVAAGAHLDTLDSGGNTPMMVAFNK-NANEIATYLE 1448
            ..|.|      |...|.:|          |.::...      ||.: ...|:|.:||
Zfish  1237 VHGHT------EAVTRSLC----------DEIERHS------AFQRWGTEEVAIWLE 1271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgANP_001259366.1 C1_1 591..640 CDD:278556 12/69 (17%)
C1_1 661..725 CDD:278556 14/68 (21%)
LCB5 813..1140 CDD:224513 156/633 (25%)
DAGKc 814..942 CDD:214487 65/127 (51%)
DAGKa 969..1123 CDD:214486 68/162 (42%)
ANK 1329..1447 CDD:238125 20/130 (15%)
ANK repeat 1329..1356 CDD:293786 6/38 (16%)
Ank_2 1330..1425 CDD:289560 16/106 (15%)
ANK repeat 1358..1391 CDD:293786 3/32 (9%)
ANK repeat 1393..1425 CDD:293786 6/31 (19%)
Ank_2 1399..>1459 CDD:289560 10/51 (20%)
dgkhXP_021334551.1 PH_DGK_type2 95..240 CDD:270093 34/177 (19%)
C1 253..302 CDD:237996 10/55 (18%)
C1 325..375 CDD:197519 14/67 (21%)
DAGKc 412..534 CDD:214487 65/127 (51%)
DAGKa 859..1016 CDD:214486 68/162 (42%)
SAM_DGK-delta-eta 1257..1321 CDD:188906 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590839
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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