DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32857 and nfu1

DIOPT Version :9

Sequence 1:NP_728443.1 Gene:CG32857 / 318252 FlyBaseID:FBgn0052857 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001116180.1 Gene:nfu1 / 403053 ZFINID:ZDB-GENE-050417-365 Length:243 Species:Danio rerio


Alignment Length:237 Identity:143/237 - (60%)
Similarity:170/237 - (71%) Gaps:24/237 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 AHQESGCGHSV---------GCGLLEL------RMPVACR------RSMFIQTQDTPNPESLKFL 83
            |::..|.|.::         |.||:..      |.||..:      |:|||||||||||.|||||
Zfish     3 AYRSVGFGRNLAAVLKRTYHGSGLIRPPVYTMGRSPVPQQTTTVFIRNMFIQTQDTPNPNSLKFL 67

  Fly    84 PGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFA 147
            ||..||..| |.||.....|..||||:.|||::|||.||||.||:||:|..| .||.:|||:|||
Zfish    68 PGRAVLDSG-TMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDFITITKTSGETEWKVIKPDVFA 131

  Fly   148 VIMDFFASGLPVLNDAQ-PNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGVV 211
            .|||||.|||||:|:|. |.|||...|||||.|.||||||||||||||||||||:::.|:|.|:|
Zfish   132 TIMDFFTSGLPVINEADAPRADTAPSEDDDEVVAMIKELLDTRIRPTVQEDGGDVLYHGFEDGIV 196

  Fly   212 KLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDE 253
            |||:||||:||||||:|||||:|||||||:||||.||||.:|
Zfish   197 KLKLQGSCTSCPSSIITLKNGIQNMLQFYVPEVEGVEQVKEE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32857NP_728443.1 Nfu_N 69..149 CDD:285874 51/80 (64%)
NifU 182..248 CDD:279451 52/65 (80%)
nfu1NP_001116180.1 Nfu_N 53..140 CDD:214919 56/87 (64%)
NifU 167..233 CDD:279451 52/65 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 122 1.000 Domainoid score I5612
eggNOG 1 0.900 - - E1_COG0694
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6369
Inparanoid 1 1.050 267 1.000 Inparanoid score I3018
OMA 1 1.010 - - QHG63177
OrthoDB 1 1.010 - - D1016782at2759
OrthoFinder 1 1.000 - - FOG0002982
OrthoInspector 1 1.000 - - oto40906
orthoMCL 1 0.900 - - OOG6_101229
Panther 1 1.100 - - LDO PTHR11178
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3877
SonicParanoid 1 1.000 - - X2337
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.870

Return to query results.
Submit another query.