DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and AT1G35330

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_174766.2 Gene:AT1G35330 / 840422 AraportID:AT1G35330 Length:328 Species:Arabidopsis thaliana


Alignment Length:110 Identity:34/110 - (30%)
Similarity:47/110 - (42%) Gaps:28/110 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YPSTSSSTTLTPSSNNRQLSDENQVKIAKRI--GL---------------MQYLPIGTYDGSSKK 88
            |.:||...|    |::.:.....:|...:|.  ||               ::.|.||      |.
plant    71 YTNTSPHGT----SSDTEEGGHGEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIG------KG 125

  Fly    89 ARECVICMAEFCVNEAVRYL-PCMHIYHVNCIDDWLLRSLTCPSC 132
            ..||.||:.||...|.:|.: ||.|.:|.:|||.||....|||.|
plant   126 GVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVC 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 21/43 (49%)
AT1G35330NP_174766.2 RING-H2_EL5-like 128..171 CDD:438124 21/43 (49%)

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