DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and AT5G45290

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001119377.1 Gene:AT5G45290 / 834565 AraportID:AT5G45290 Length:546 Species:Arabidopsis thaliana


Alignment Length:175 Identity:42/175 - (24%)
Similarity:63/175 - (36%) Gaps:52/175 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SDDISLLRGNDSQISGTQPVYHQGE----HYQRELYPS--------------TSSSTTLTPSSNN 56
            ||.:...|...||:...|.:..:.|    |:.|....|              ...|||.|....|
plant   358 SDFLERRRRIRSQVRALQRLGSRFENVAVHHDRSCVLSGQDQAGRCTCRAVTNRGSTTATTDETN 422

  Fly    57 RQLSDENQVKIAKRI-------------------------------GLMQYLPIGTYDGS-SKKA 89
            .:.|....|.:|:.:                               .::..|||..|..| |:..
plant   423 ARASISRIVLLAEALFEVLDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYTKSQSEDP 487

  Fly    90 RECVICMAEFCVNEAVRYLPCMHIYHVNCIDDWL--LRSLTCPSC 132
            .:|.||:.|:...:::|.|||.|.:|..|:|.||  :.|..||.|
plant   488 SQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLC 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 18/44 (41%)
AT5G45290NP_001119377.1 RING_Ubox 486..533 CDD:473075 18/47 (38%)

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