DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and AT3G14320

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_188049.1 Gene:AT3G14320 / 820652 AraportID:AT3G14320 Length:204 Species:Arabidopsis thaliana


Alignment Length:90 Identity:31/90 - (34%)
Similarity:49/90 - (54%) Gaps:10/90 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SSNNRQLSDENQVKIAKRIGLMQY----LPIGTYDGSS-KKARECVICMAEFCVNEAVRYLP-CM 111
            ::|:..:|    :.|.:|:|:..|    :||..::... |...|||:|::|....:..|.|| |.
plant    48 NNNDGHVS----ITIKERVGIKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCD 108

  Fly   112 HIYHVNCIDDWLLRSLTCPSCLEPV 136
            |.:||.|||.||..:.|||.|.:.|
plant   109 HWFHVECIDSWLQSNSTCPICRKRV 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 20/42 (48%)
AT3G14320NP_188049.1 RING-H2_EL5-like 87..130 CDD:438124 20/42 (48%)
HRD1 <88..194 CDD:227568 21/46 (46%)

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