DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and Rnf130

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:XP_038942740.1 Gene:Rnf130 / 652955 RGDID:1562041 Length:439 Species:Rattus norvegicus


Alignment Length:82 Identity:27/82 - (32%)
Similarity:39/82 - (47%) Gaps:11/82 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NNRQLSDENQVKIAKRIGLMQYLPIGTYDGSSKKA----RECVICMAEFCVNEAVRYLPCMHIYH 115
            |.|:|.|..:..|:|       |...|.....|:.    ..|.:|:..:..|:.||.|||.|::|
  Rat   230 NQRRLGDAAKKAISK-------LTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFH 287

  Fly   116 VNCIDDWLLRSLTCPSC 132
            .:|:|.||....|||.|
  Rat   288 KSCVDPWLSEHCTCPMC 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 18/42 (43%)
Rnf130XP_038942740.1 PA_GRAIL_like 40..179 CDD:239037
HRD1 <197..366 CDD:227568 27/82 (33%)
RING-H2_RNF130 262..310 CDD:319717 18/43 (42%)
Blue background indicates that the domain is not in the aligned region.

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