DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and RLIM

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_057204.2 Gene:RLIM / 51132 HGNCID:13429 Length:624 Species:Homo sapiens


Alignment Length:140 Identity:40/140 - (28%)
Similarity:61/140 - (43%) Gaps:19/140 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TSDDISLLRGNDSQISGTQPVYHQGEHYQRELYPSTSSSTTLTPSSNNRQL-----SDENQVKIA 68
            ||.|:.......|..||:.....:|.|..    |.|...:...|..:..|.     .|::|.:  
Human   488 TSSDLFEGSNEGSSSSGSSGARREGRHRA----PVTFDESGSLPFLSLAQFFLLNEDDDDQPR-- 546

  Fly    69 KRIGL----MQYLPIGTYDGSSKKARECVICMAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTC 129
               ||    :..|.:.:: |.:...:.|.:|:.|:.....:|.|||.|.|||:|||.||..:.||
Human   547 ---GLTKEQIDNLAMRSF-GENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTC 607

  Fly   130 PSCLEPVDAA 139
            |.|...|.|:
Human   608 PICRRAVLAS 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 19/41 (46%)
RLIMNP_057204.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..251
PHA03307 159..>348 CDD:223039
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..276
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..363
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 424..522 10/37 (27%)
RING-H2_RNF12 568..618 CDD:438336 22/50 (44%)
PDZ-binding. /evidence=ECO:0000255 621..624
Blue background indicates that the domain is not in the aligned region.

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