DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and Rnf150

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001178022.1 Gene:Rnf150 / 364983 RGDID:1304572 Length:437 Species:Rattus norvegicus


Alignment Length:82 Identity:27/82 - (32%)
Similarity:41/82 - (50%) Gaps:11/82 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NNRQLSDENQVKIAKRIGLMQYLPIGTYDGSSKKAR----ECVICMAEFCVNEAVRYLPCMHIYH 115
            |.|:|.|..:..|:|       |.:.|.....|:..    .|.:|:..:..::.||.|||.|::|
  Rat   243 NQRRLGDAAKKAISK-------LQVRTIRKGDKETESDFDNCAVCIEGYKPSDVVRILPCRHLFH 300

  Fly   116 VNCIDDWLLRSLTCPSC 132
            .:|:|.|||...|||.|
  Rat   301 KSCVDPWLLDHRTCPMC 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 18/42 (43%)
Rnf150NP_001178022.1 PA_GRAIL_like 45..192 CDD:239037
RING-H2_RNF150 269..323 CDD:438456 18/49 (37%)
Blue background indicates that the domain is not in the aligned region.

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