DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and AT5G07225

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_974747.1 Gene:AT5G07225 / 2745979 AraportID:AT5G07225 Length:234 Species:Arabidopsis thaliana


Alignment Length:168 Identity:39/168 - (23%)
Similarity:62/168 - (36%) Gaps:51/168 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NDSQISGTQPVYHQGEHYQRELYPST-----------------------SSSTTLTPSSNN---- 56
            |.|:...:|.:...|.|:|.:..|:|                       .|..||.|.:::    
plant    66 NSSEHYTSQDISRSGYHHQFQNQPNTRHRQCFKCWISWLMLMPRRLFVPRSIPTLMPYNDSPHSF 130

  Fly    57 ---RQLSDENQV----KIAKRI----------------GLMQYLPIGTYDGSSKKARECVICMAE 98
               ..|.||:..    :|.:||                |.:..||...:. .|.:.:.|:||.::
plant   131 SGYEHLEDESNQHSLDEIIERIEERERGNTSVGEGLTEGQISQLPTIKFK-PSLEDKMCMICHSD 194

  Fly    99 FCVNEAVRYLPCMHIYHVNCIDDWLLRSLTCPSCLEPV 136
            :...:.:..|||.|.||.:||..||..|..|..|...|
plant   195 YVRGDKLTILPCTHKYHKDCISHWLQNSKLCCVCQREV 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 15/41 (37%)
AT5G07225NP_974747.1 RING_Ubox 188..232 CDD:473075 16/43 (37%)

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