DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rnf11 and meu34

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_593329.1 Gene:meu34 / 2543036 PomBaseID:SPAC3A12.03C Length:309 Species:Schizosaccharomyces pombe


Alignment Length:63 Identity:22/63 - (34%)
Similarity:36/63 - (57%) Gaps:8/63 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 CVICMAEFCVNEAVRYLPCMHIYHVNCIDDWL-LRSLTCPSCLE-------PVDAALLTSYES 146
            |:||.|::..::.:|.|||.|::|..|||.|: ....:||.|.|       .:|||...::|:
pombe   205 CIICYADYAFDDILRVLPCEHVFHTQCIDTWMTTMKASCPLCNEDYYKYFLQMDAASSVTHEN 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 16/41 (39%)
meu34NP_593329.1 RING-H2_RNF11 204..247 CDD:438131 16/41 (39%)

Return to query results.
Submit another query.