DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and toe-4

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_493231.1 Gene:toe-4 / 173144 WormBaseID:WBGene00012194 Length:489 Species:Caenorhabditis elegans


Alignment Length:135 Identity:37/135 - (27%)
Similarity:57/135 - (42%) Gaps:29/135 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DSQISGTQPVYHQGEHYQRELYPSTSSSTTLTPSSNNRQLSDENQVKIAKRIGLMQYLPIG---- 80
            :|.|:...|.| .||:.  ||:   .|...|.|:|....:...:...     ||...||:|    
 Worm   356 NSPINVHAPGY-VGEYV--ELF---RSQQFLFPTSERYGIDRHHMFG-----GLDLDLPVGASKV 409

  Fly    81 ---TY----------DGSSKKARECVICMAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTCPSC 132
               |:          ||...: ..|.:|::.|...|:::.|.|.|::|..||..||..:..||.|
 Worm   410 EIDTFTIPTVYAKKTDGEEDE-DTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMC 473

  Fly   133 LEPVD 137
            .|.:|
 Worm   474 REEID 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 14/41 (34%)
toe-4NP_493231.1 RING-H2_RHA1-like 430..476 CDD:438483 15/46 (33%)

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