DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf11 and rnf128b

DIOPT Version :10

Sequence 1:NP_726563.1 Gene:Rnf11 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:XP_021336982.2 Gene:rnf128b / 100536511 ZFINID:ZDB-GENE-100316-10 Length:400 Species:Danio rerio


Alignment Length:82 Identity:31/82 - (37%)
Similarity:40/82 - (48%) Gaps:6/82 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NRQLSDENQVKI----AKRIGLMQYLPIGTYDGS-SKKARECVICMAEFCVNEAVRYLPCMHIYH 115
            ||||. ..|::|    .|.||.::...:.|.|.. ......||:|...:...|.|..|||.|:||
Zfish   222 NRQLR-RQQMEIKRETEKAIGKLEVRTLRTNDPEVDSDDTGCVVCTDSYQRGEQVTVLPCRHLYH 285

  Fly   116 VNCIDDWLLRSLTCPSC 132
            ..||:.|||...|||.|
Zfish   286 KKCIEPWLLEHPTCPMC 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf11NP_726563.1 RING-H2_RNF11 91..133 CDD:438131 20/42 (48%)
rnf128bXP_021336982.2 PA_GRAIL_like 47..179 CDD:239037
COG5540 <188..303 CDD:227827 31/82 (38%)
RING_Ubox 260..308 CDD:473075 20/43 (47%)
Blue background indicates that the domain is not in the aligned region.

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