DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32850 and rnf6

DIOPT Version :9

Sequence 1:NP_726563.1 Gene:CG32850 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster
Sequence 2:XP_017209360.1 Gene:rnf6 / 100359398 ZFINID:ZDB-GENE-100209-1 Length:799 Species:Danio rerio


Alignment Length:66 Identity:23/66 - (34%)
Similarity:39/66 - (59%) Gaps:4/66 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 GTYDGSSKKARECVICMAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTCPSCLEPVDAALLTSY 144
            |..:...::.|.|.:|:.|:.....:|.|||.|.:|::|||.||..:.|||.|.:|:    |:|:
Zfish   737 GQVNLEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPI----LSSH 797

  Fly   145 E 145
            :
Zfish   798 Q 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32850NP_726563.1 zf-RING_2 91..132 CDD:290367 17/40 (43%)
rnf6XP_017209360.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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