DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32847 and AT2G42030

DIOPT Version :9

Sequence 1:NP_730026.1 Gene:CG32847 / 318245 FlyBaseID:FBgn0052847 Length:164 Species:Drosophila melanogaster
Sequence 2:NP_181733.1 Gene:AT2G42030 / 818803 AraportID:AT2G42030 Length:425 Species:Arabidopsis thaliana


Alignment Length:81 Identity:37/81 - (45%)
Similarity:49/81 - (60%) Gaps:4/81 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DESFYECNICLDTAQNAVVSMCGHLFCWPCLYQWILTKPDHTVCPVCKSGVDRSKVIPVYARNDK 76
            |.||::|.||||.:::.||:.||||:||.||||| |...:...|||||..|....|.|:|.|..:
plant   135 DGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQW-LQVSEAKECPVCKGEVSVKTVTPIYGRGIQ 198

  Fly    77 RQED---PRDKTPPRP 89
            ::|.   ...|.|.||
plant   199 KRESEEVSNTKIPSRP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32847NP_730026.1 PLN03208 4..>91 CDD:178747 37/81 (46%)
RING 17..60 CDD:238093 23/42 (55%)
AT2G42030NP_181733.1 PLN03208 124..>214 CDD:178747 35/79 (44%)
RING-HC_AtRMA_like 139..182 CDD:319659 23/43 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5574
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1510545at2759
OrthoFinder 1 1.000 - - FOG0000717
OrthoInspector 1 1.000 - - mtm1175
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12313
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.880

Return to query results.
Submit another query.