DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG32847 and rnf5

DIOPT Version :9

Sequence 1:	NP_730026.1	Gene:	CG32847 / 318245	FlyBaseID:	FBgn0052847	Length:	164	Species:	Drosophila melanogaster
Sequence 2:	NP_001017071.1	Gene:	rnf5 / 549825	XenbaseID:	XB-GENE-974969	Length:	168	Species:	Xenopus tropicalis

Alignment Length:	157	Identity:	68/157 - (43%)
Similarity:	99/157 - (63%)	Gaps:	8/157 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 YECNICLDTAQNAVVSMCGHLFCWPCLYQWILTKPDHTVCPVCKSGVDRSKVIPVYARNDKRQED 80
            |||||||:||:..|||:||||:|||||:||:.|:||...|||||:|:.|.||||:|.|.|..|:|
Frog    12 YECNICLETAREPVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVIPIYGRGDSNQKD 76

  Fly    81 PRDKTPPRPTGIWSDYANDLELGL--FS----YLLFGL-FFPYGALSSYLDMDEPLN-PAADHGI 137
            ||.||||||.|...:..|....|:  |:    ::.||: .||:|..::..:.::..: |.||.|:
Frog    77 PRLKTPPRPQGQRPEPENRAGGGVPGFTDTGFHMSFGIGAFPFGFFTTVFNTNDLHSAPRADTGL 141

  Fly   138 RDGQNETLLSKFFLYVAIMLIIYMIVI 164
            ...:...|....||.:|....:::|.:
Frog   142 PQSRFFGLPDSLFLIIAAFFFLWLISV 168

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG32847	NP_730026.1	PLN03208	4..>91	CDD:178747	50/74 (68%)
CG32847	NP_730026.1	RING	17..60	CDD:238093	29/42 (69%)
rnf5	NP_001017071.1	RING-HC_RNF5	12..57	CDD:319657	31/44 (70%)
rnf5	NP_001017071.1	RING-HC finger (C3HC4-type)	14..54	CDD:319657	26/39 (67%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	90	1.000	Domainoid score	I7661
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1510545at2759
OrthoFinder	1	1.000	-	-		FOG0000717
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X682
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	5.010