DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10962 and rdhB

DIOPT Version :9

Sequence 1:NP_788887.1 Gene:CG10962 / 31824 FlyBaseID:FBgn0030073 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001262831.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster


Alignment Length:241 Identity:99/241 - (41%)
Similarity:142/241 - (58%) Gaps:6/241 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WQNRVAVISGASSGIGAACARLLVAAGLQVVGLARRTDRLEQLRQSLPAEQRMRFHQHKCDVSQE 68
            |:|:|||::|||.||||..|..|..||:.|||||||.:.:|.||..:....::...|  ||::.|
  Fly     7 WRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQ--CDLNDE 69

  Fly    69 LQVDTAFEWIEKELGGIDVLINNAGIVLGGQLIDMPTKDINNILQTNLMGSIYCTKLAASSMRRR 133
            .|:.:||.||.::...|.|||.||||:....|.:.|||||..:..||::.:..|.:.|...|...
  Fly    70 EQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKHMAAV 134

  Fly   134 QVAGHLIFVNSTAGVAGYK-PDPADESLNAYTPSKFALTAVQEICRQELINQGSKIKTTSINPGW 197
            :|.||::.:||   |.|:: |:......:.|..:|.|:||:.:..|||:......||.|||.||.
  Fly   135 KVRGHIVVMNS---VLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGM 196

  Fly   198 VATEIVPDETKAKLGEVILQADDVAQAVLYALSTPPHTQVEQITLR 243
            |.|:.:...::|......|||.|||:||||||:||...|||.|.|:
  Fly   197 VDTDFLSVYSQAVAELPKLQARDVAKAVLYALNTPDGVQVEDIILQ 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10962NP_788887.1 YdfG 1..249 CDD:226674 99/241 (41%)
NADB_Rossmann 1..243 CDD:304358 98/239 (41%)
rdhBNP_001262831.1 Mgc4172-like_SDR_c 4..244 CDD:187601 99/241 (41%)
YdfG 9..241 CDD:226674 97/236 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I2775
eggNOG 1 0.900 - - E2759_KOG1205
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I2312
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45743
OrthoDB 1 1.010 - - D101130at6960
OrthoFinder 1 1.000 - - FOG0000588
OrthoInspector 1 1.000 - - otm51373
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR43115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.980

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