DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10962 and hmgcs1

DIOPT Version :9

Sequence 1:NP_788887.1 Gene:CG10962 / 31824 FlyBaseID:FBgn0030073 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001120172.1 Gene:hmgcs1 / 100145212 XenbaseID:XB-GENE-942074 Length:520 Species:Xenopus tropicalis


Alignment Length:64 Identity:18/64 - (28%)
Similarity:28/64 - (43%) Gaps:12/64 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 ESLNAYTPSKFALTA--VQEICRQELINQGSKIKTTSINPGWVAT--------EIVPDETKAKL 211
            |:.|.||||.:...|  :.:...|:|  .|.:|...|...|:.||        :.:|..:..||
 Frog   341 ENGNMYTPSVYGCLASVLAQYSPQQL--AGQRIGVFSYGSGFAATMYSLRVSQDAMPGSSLDKL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10962NP_788887.1 YdfG 1..249 CDD:226674 18/64 (28%)
NADB_Rossmann 1..243 CDD:304358 18/64 (28%)
hmgcs1NP_001120172.1 HMG-CoA-S_euk 13..469 CDD:273826 18/64 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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