DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32808 and Cfd

DIOPT Version :9

Sequence 1:NP_726740.1 Gene:CG32808 / 318221 FlyBaseID:FBgn0052808 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:237 Identity:80/237 - (33%)
Similarity:121/237 - (51%) Gaps:20/237 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GKIVNGTTAGPGEFPFVVSLRRAKSGRHSCGATLLNPYWVLTAAHCVRG-SSPEQLDLQYGSQML 91
            |:|:.|..|.....|::.|::  .:|.|.||.||::..|||:||||:.| :..|.:.:..|:..|
  Rat    24 GRILGGQEAMAHARPYMASVQ--VNGTHVCGGTLVDEQWVLSAAHCMDGVTKDEVVQVLLGAHSL 86

  Fly    92 ARNS--SQVARVAAIFVHPGYEPEDKYVNDIALLQLAQSVALSKFVQPVRLP-EPRQVTPGNASA 153
            :...  ..:..|.::.:|||..| |...:|:.|.:|:.:.:|...|:|:.|. |.|:|.||....
  Rat    87 SSPEPYKHLYDVQSVVLHPGSRP-DSVEDDLMLFKLSHNASLGPHVRPLPLQREDREVKPGTLCD 150

  Fly   154 VLAGWGLNATGGVVQQHLQKVKLQVFSDTECSERHQTYLHDSQI-----CAGLPEGGKGQCSGDS 213
            | ||||:....|.....||::.:.:.....|:.|  || ||..|     ||  ....:..|.|||
  Rat   151 V-AGWGVVTHAGRRPDVLQQLTVSIMDRNTCNLR--TY-HDGAITKNMMCA--ESNRRDTCRGDS 209

  Fly   214 GGPLLLIGSDTQVGIVSWSIKPCARPPFPGVFTEVSAYVDWI 255
            |||  |:..|....:|:|..:.|.....|||||.|:.||.||
  Rat   210 GGP--LVCGDAVEAVVTWGSRVCGNRRKPGVFTRVATYVPWI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32808NP_726740.1 Tryp_SPc 29..255 CDD:214473 77/234 (33%)
Tryp_SPc 30..258 CDD:238113 79/235 (34%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 79/235 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X21
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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