DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32808 and svh-1

DIOPT Version :9

Sequence 1:NP_726740.1 Gene:CG32808 / 318221 FlyBaseID:FBgn0052808 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:268 Identity:82/268 - (30%)
Similarity:130/268 - (48%) Gaps:18/268 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MAWLARLALFYTATFLLAGASGEDGKIVNGTTAGPGEFPFVVSLRRAKSGRHSCGATLLNPYWVL 68
            |:..::..|.|........|.....::|.|....||.||:..:||...:..|.|||::|:...::
 Worm   687 MSSASQCGLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLI 751

  Fly    69 TAAHCV----RGSSPEQLDLQYGSQMLARNSSQVARVAAIFVHPGYEPEDKYVNDIALLQLA-QS 128
            |||||.    |.||.|.:...:.:.....| .|:..:..|..:|.|  :|.:.:|||:|::. ..
 Worm   752 TAAHCFEEDERVSSYEVVVGDWDNNQTDGN-EQIFYLQRIHFYPLY--KDIFSHDIAILEIPYPG 813

  Fly   129 VALSKFVQPVRLPEPRQV-TPGNASAVLAGWGLNATGGVVQQHLQKVKLQVFSDTECSERHQTY- 191
            :..:::.||:.||....| |||. ..|::|||  :.|....:.||...:.:.:..:|....|.| 
 Worm   814 IEFNEYAQPICLPSKDFVYTPGR-QCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQIYS 875

  Fly   192 -LHDSQICAGLPEGGKGQCSGDSGGPLLL---IGSDTQVGIVSWSIKPCARPPFPGVFTEVSAYV 252
             :..|..|||..|||...|.||||||...   .|:....|::||. ..||:...||::|.|:.|:
 Worm   876 SMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWG-DGCAQKKQPGIYTMVAPYL 939

  Fly   253 DWIVETVN 260
            .||...:|
 Worm   940 SWISAIIN 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32808NP_726740.1 Tryp_SPc 29..255 CDD:214473 75/236 (32%)
Tryp_SPc 30..258 CDD:238113 77/238 (32%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 77/238 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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