DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32808 and Gzmf

DIOPT Version :9

Sequence 1:NP_726740.1 Gene:CG32808 / 318221 FlyBaseID:FBgn0052808 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_034504.1 Gene:Gzmf / 14943 MGIID:109254 Length:248 Species:Mus musculus


Alignment Length:249 Identity:89/249 - (35%)
Similarity:134/249 - (53%) Gaps:26/249 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TFLLAGASGEDGKIVNGTTAGPGEFPFVVSLRRAKSG--RHSCGATLLNPYWVLTAAHCVRGSSP 79
            |.||...:|.: :|:.|....|...|::..:|..|..  |||||..|:..|:|||||||. ||| 
Mouse     9 TLLLPLRAGAE-EIIGGHEVKPHSRPYMARVRFVKDNGKRHSCGGFLVQDYFVLTAAHCT-GSS- 70

  Fly    80 EQLDLQYGSQML--ARNSSQVARVAAIFVHPGYEPEDKYVNDIALLQLAQSVALSKFVQPVRLPE 142
              :.:..|:..:  ...:.|:..||....||.|:.:|. .:||.||:|......:|.|:|::||.
Mouse    71 --MRVILGAHNIRAKEETQQIIPVAKAIPHPAYDDKDN-TSDIMLLKLESKAKRTKAVRPLKLPR 132

  Fly   143 PR-QVTPGNASAVLAGWG---LNATGGVVQQH--LQKVKLQVFSDTECSERHQTYLHDSQICAGL 201
            |. :|.||:..:| ||||   :|||    |:.  |::.:|.:..|.||.:....|....|||||.
Mouse   133 PNARVKPGHVCSV-AGWGRTSINAT----QRSSCLREAQLIIQKDKECKKYFYKYFKTMQICAGD 192

  Fly   202 PEGGKGQCSGDSGGPLLLIGSDTQVGIVSWSIKPCARPPFPGVFTEVSAYVDWI 255
            |:..:...|||||||  |:.::...|::::.:.   |...|||||:|..|:.||
Mouse   193 PKKIQSTYSGDSGGP--LVCNNKAYGVLTYGLN---RTIGPGVFTKVVHYLPWI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32808NP_726740.1 Tryp_SPc 29..255 CDD:214473 83/235 (35%)
Tryp_SPc 30..258 CDD:238113 85/236 (36%)
GzmfNP_034504.1 Tryp_SPc 20..241 CDD:214473 83/235 (35%)
Tryp_SPc 21..244 CDD:238113 85/236 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.