DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk8 and scnn1b

DIOPT Version :9

Sequence 1:NP_001036260.3 Gene:ppk8 / 318213 FlyBaseID:FBgn0052792 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001072437.1 Gene:scnn1b / 779891 XenbaseID:XB-GENE-949109 Length:646 Species:Xenopus tropicalis


Alignment Length:665 Identity:131/665 - (19%)
Similarity:233/665 - (35%) Gaps:183/665 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRVPRNRQRAFF--ASQQKRSRPQHLQITLSTWRRILSRNTDEFCRNTTIHGLKYINNSKLRSSD 63
            :.|...|.:.:|  |..:.:..|.:....|..|          ||.||..||.|.|  .|.....
 Frog     2 LHVKMKRLKRYFTRALHRIQKGPGYTYKELLVW----------FCDNTNTHGPKRI--IKEGPKK 54

  Fly    64 RLFFGIALLVVLSLAIYLIQDAFDKWNTNPVIV-----GIDPELT-SIANEPFPAVTICNLNQAL 122
            |:.:.|..||...|..         |....:|:     |:...|: ......|||||:||.|...
 Frog    55 RVMWFILTLVFAGLVF---------WQWGVLILTYLSYGVSVSLSIGFKTMEFPAVTVCNANPYK 110

  Fly   123 AERVEHFSND-----SVEFAMLQLLCRRKVDV-------ELVKTNDSRWEEF---ILNISQPCNS 172
            ..||:....|     :.....:|...:.:.:.       :.|..:.:.|...   :::.:.|.|.
 Frog   111 YSRVKPLLKDLDALVATALDRIQFSSQDQANTFTQSSTNQNVTLDPTLWNHIPLVVIDETDPSNP 175

  Fly   173 MVIHC-------------RFGADD-------YECARLFHPIVTDEGLCCVF-------NMLHPRF 210
            :|.:.             |..::|       |:.|.   .:.|:....||:       ..|...:
 Frog   176 IVNNIFDNNAIYSKNNSFRNSSEDQTSYSQRYKVAM---KLCTNNNTQCVYRNFTSGIQALQEWY 237

  Fly   211 MYR-----KRVPYSHRNISLPEGFHA--------------------------------VNWHAEL 238
            :.:     ..||.:.|   :..||.|                                .||..| 
 Frog   238 LLQLSSIFSNVPLADR---IAMGFKAEDLILTCLFGGQPCSYRNFTRIYDADYGNCYIFNWGQE- 298

  Fly   239 GYRKRGFQPDGDNPLYPRRAQGTGESLGLSLTLDVQADAYYCSSSSSIGFKIALHSPNESPNVRE 303
                      |::|:   .:...|...||.|.||::...|.....::...::.||.....|.|::
 Frog   299 ----------GEDPM---ASANPGADFGLKLVLDIEQGEYLPYVQTTAAARLILHQQRSFPFVKD 350

  Fly   304 TGVLLAPGMETKLRIDPSKILTEKHLRNVDRRSRRCLFH------NELKLRWFAHYTQRNCVAEC 362
            .|:...||.||.:     .:|.:: |.:::.....|..:      ..|...:.:.|:.::|:..|
 Frog   351 LGIYAMPGTETSI-----AVLVDQ-LEHMEAPYSSCTVNGSDIPVQNLYAEFNSSYSIQSCLRSC 409

  Fly   363 LSGWLIRHCGCVTFYMPRLNANDTICPLHKR----ECVELIRFRTIIAMESCLDECLPSCFDLSF 423
            ....:::.|||..:..|..|.:: .|...|.    .|...:| .::...|||:..|...|.|..:
 Frog   410 YQEQMVQTCGCADYQYPLPNGSE-YCSNDKYPDWVPCYYGLR-DSVADRESCISLCQQPCNDTQY 472

  Fly   424 SAIAYSTRISLDGFRETPSNGG--WNFTDAYVER-----------SVAVVNMYFKDPTFRANKQT 475
            ..:     ||:   .:.||.|.  |.|.....|:           .:..:|:||::..:|:..::
 Frog   473 KMV-----ISM---ADWPSAGAQDWIFHVLSYEKDSSHNITVNRNGIVRLNIYFQEFNYRSITES 529

  Fly   476 EFIGFSDFLSGVGGLMGLFLGFSFLSIAE-------CVYFALIRPCRTCSEIRQLNQ-------- 525
            |.......||.:||..|.::|.|.|.|.|       ||:..:::......:.||..|        
 Frog   530 EATNVVWLLSNLGGQFGFWMGGSVLCIIEFGEIIIDCVWITILKLLAWIKDRRQRRQRAQYADPP 594

  Fly   526 PRVHQMNLKRSPTPG 540
            |.|.:: ::....||
 Frog   595 PTVSEL-VEAHTNPG 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk8NP_001036260.3 ASC 42..508 CDD:279230 117/580 (20%)
scnn1bNP_001072437.1 ENaC 27..632 CDD:273304 126/640 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.