DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk8 and Scnn1b

DIOPT Version :10

Sequence 1:NP_001036260.3 Gene:ppk8 / 318213 FlyBaseID:FBgn0052792 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus


Alignment Length:633 Identity:131/633 - (20%)
Similarity:224/633 - (35%) Gaps:176/633 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FCRNTTIHGLKYI--NNSKLRSSDRLFFGIAL----LVVLSLAIYLIQDAFDKWNTNPVIVGIDP 100
            :|.||..||.|.|  ...|.::   ::|.:.|    ||.....:::  ..:..|.   |.|.:..
  Rat    29 YCNNTNTHGPKRIICEGPKKKA---MWFLLTLLFACLVCWQWGVFI--QTYLSWE---VSVSLSM 85

  Fly   101 ELTSIANEPFPAVTICNLNQALAERVEHFSND---SVEFAMLQLLCRRKVDVELVKT-NDSRWEE 161
            ...::   .|||||:||.:.....:|:|...|   .:|..:.::|..:........| |.:.|..
  Rat    86 GFKTM---NFPAVTVCNSSPFQYSKVKHLLKDLYKLMEAVLDKILAPKSSHTNTTSTLNFTIWNH 147

  Fly   162 --------------FILNI-------SQP-----CNSMVIHCRF-----GADDYEC--------- 186
                          .:||:       |.|     ||:.  .|:.     .|:...|         
  Rat   148 TPLVLIDERNPDHPVVLNLFGDSHNSSNPAPGSTCNAQ--GCKVAMRLCSANGTVCTFRNFTSAT 210

  Fly   187 -----------ARLFHPIVTDE----G-------LCCVFNMLHPRFMYRKRVPYSHRN---ISLP 226
                       ..:|..::..:    |       |.|:|.          ..|.||||   |..|
  Rat   211 QAVTEWYILQATNIFSQVLPQDLVGMGYAPDRIILACLFG----------TEPCSHRNFTPIFYP 265

  Fly   227 E--GFHAVNWHAELGYRKRGFQPDGDNPLYPRRAQGTGESLGLSLTLDVQADAYYCSSSSSIGFK 289
            :  ..:..||    |..::.. |.. ||         |...||.|.||:..:.|....:|:.|.:
  Rat   266 DYGNCYIFNW----GMTEKAL-PSA-NP---------GTEFGLKLILDIGQEDYVPFLASTAGAR 315

  Fly   290 IALHSPNESPNVRETGVLLAPGMETKLRIDPSKILTEKHLRNVDRRSRRCLFH------NELKLR 348
            :.||.....|.:||.|:....|.||.:     .:|.:| |:........|..:      ..|...
  Rat   316 LMLHEQRTYPFIREEGIYAMAGTETSI-----GVLLDK-LQGKGEPYSPCTMNGSDVAIQNLYSD 374

  Fly   349 WFAHYTQRNCVAECLSGWLIRHCGCVTFYMPRLNANDTICPLHKRE------CVELIRFRTIIAM 407
            :...|:.:.|:..|....:|.:|.|..:..| |.|.:..|  :.|:      |...::. :::..
  Rat   375 YNTTYSIQACLHSCFQDHMIHNCSCGHYLYP-LPAGEKYC--NNRDFPDWAYCYLSLQM-SVVQR 435

  Fly   408 ESCLDECLPSCFDLSFSAIAYSTRISLDGFRETPSNGG--W-------------NFTDAYVERSV 457
            |:||..|..||.|..     |...||:   .:.||...  |             |.|  ...:.:
  Rat   436 ETCLSMCKESCNDTQ-----YKMTISM---ADWPSEASEDWILHVLSQERDQSSNIT--LSRKGI 490

  Fly   458 AVVNMYFKDPTFRANKQTEFIGFSDFLSGVGGLMGLFLGFSFLSIAE-------CVYFALIRPCR 515
            ..:|:||::..:|..:::........||.:||..|.::|.|.|.:.|       .::..:|:...
  Rat   491 VKLNIYFQEFNYRTIEESPANNIVWLLSNLGGQFGFWMGGSVLCLIEFGEIIIDFIWITVIKLVA 555

  Fly   516 TCSEIRQLNQPRVHQMNLKRSPTPGNIRYISAAD--WFQAELAHQQPN 561
            :|..:|:....|.:     ..|.|.....:.|..  .||.:....:||
  Rat   556 SCKGLRRRRPQRPY-----TGPPPTVAELVEAHTNCVFQPDTTSCRPN 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk8NP_001036260.3 ASC 42..508 CDD:459966 120/576 (21%)
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 131/633 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620 1/1 (100%)
PY motif, recruits WW domain-containing proteins and is thereby required for ubiquitination and inhibition of the channel by NEDD4 and NEDD4L. /evidence=ECO:0000269|PubMed:12654927, ECO:0000269|PubMed:8665844 614..618
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.