DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk8 and asic-2

DIOPT Version :9

Sequence 1:NP_001036260.3 Gene:ppk8 / 318213 FlyBaseID:FBgn0052792 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:525 Identity:103/525 - (19%)
Similarity:195/525 - (37%) Gaps:113/525 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EFCRNTTIHGLKYINNSKLRSSDRLFFGIALLVVLSLAIYLIQDAFDKWNTNPVIVGIDPELTSI 105
            :|...:|:..:.::.|:..:.| |:|:....|.||.:..|.:.....|:.:.|..|.     |.|
 Worm    12 DFSNWSTVAVVPHVANANNKIS-RIFWIAIFLFVLGMFAYELYILIAKFFSYPATVN-----TEI 70

  Fly   106 ANEP--FPAVTICNLNQALAERVEHFSNDSVEFAMLQLLCRRKVDVELVKTNDSRW-------EE 161
            ..|.  ||.||:||:|......|:  ||.:  |:.:..|.....|..:...:..:|       |.
 Worm    71 LFEKQIFPVVTVCNMNPYKYSVVK--SNSA--FSSVNTLMTTYSDATVGTFSTDKWGLYADNDET 131

  Fly   162 FILNISQPCNSMVIHCRFGADDYECARL--FHPIVTDEGLCCVFNMLHPRFMYRKRVPYSHRNIS 224
            :.|: |:..:::|:.....:|..:...|  :..::.|    |.|          ..:|.|..:.:
 Worm   132 YDLD-SRAADALVLEANLISDTAKVPALYTYADLIQD----CSF----------AGIPCSESDFT 181

  Fly   225 -----LPEGFHAVNWHAELGY--RKRGFQPDGDNPLYPRRAQGTGESLGLSLTLDV-----QADA 277
                 :....::.|..|.|.|  .:.|.|                  .||.|.|.|     ..:.
 Worm   182 KFIDPVYGACYSFNEDASLNYSVSREGIQ------------------FGLKLMLTVTQTKTNGNT 228

  Fly   278 YYCSSSSSIGFKIALHSPNESPNVRETGVLLAPGMETKLRIDPSKILTEK--HLRNVDRRSRRCL 340
            ....::...|.:|.::|...||.:...|:....|.|:.:.:..::.:..|  :...|||......
 Worm   229 DSLPTTKLAGARIGVNSRGSSPGLDSNGIDAGVGYESAVSVSLTQNVRAKKPYGTCVDREPDSSD 293

  Fly   341 FHNELKLRWFAHYTQRNCVAECLSGWLIRHCGCVTFYMPR--LNANDTICPLHKR--ECVELIRF 401
            ::.:.      .||...|...|.....|..|.|..   ||  |.:.||.|...|.  :|::.::.
 Worm   294 YYKDF------IYTLETCFNGCKQRDTIAKCQCAN---PRLALGSTDTACQPIKADLDCLQTLKG 349

  Fly   402 R------TIIAMESCLDECLPSCFDLSFSAIAYSTRISLDGF---------RETPSNGGWNFTDA 451
            .      .|..:..|  .|.|.|.:.:     |:..:||..|         ..|...|..:.|::
 Worm   350 NQTSSTPNIDLLVEC--NCNPPCDEST-----YTPTVSLAQFPSTSYYVATSSTAGVGSCSSTNS 407

  Fly   452 ----------YVERSVAVVNMYFKDPTFRANKQTEFIGFSDFLSGVGGLMGLFLGFSFLSIAECV 506
                      :...:..::.::.:..::....:|.....|:.::.:||..||:||.|.:|:.|..
 Worm   408 KFSSKSDCQKWYNNNGMIIQVFLETLSYELYTETAGYTVSNVINDLGGQAGLWLGLSVISVVEMT 472

  Fly   507 YFALI 511
            ...|:
 Worm   473 GLMLV 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk8NP_001036260.3 ASC 42..508 CDD:279230 102/519 (20%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 102/520 (20%)
ASC 13..471 CDD:279230 101/516 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.730

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