DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk8 and del-9

DIOPT Version :9

Sequence 1:NP_001036260.3 Gene:ppk8 / 318213 FlyBaseID:FBgn0052792 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_508622.2 Gene:del-9 / 182767 WormBaseID:WBGene00015957 Length:579 Species:Caenorhabditis elegans


Alignment Length:599 Identity:109/599 - (18%)
Similarity:200/599 - (33%) Gaps:204/599 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LSRNTDE------FCRNT-TIHGLKYINNSKLRSSDRLFFGIALLVVLSLAI------------- 79
            ||.::|:      ..|.| |:|||:.:   .|.||.||.....|:|:|:|.:             
 Worm    69 LSDSSDDNDDSLYLLRETSTLHGLRDV---MLSSSGRLRMVWVLIVILALFMTFQGCYQIMDEYS 130

  Fly    80 -------YLIQDAFDKWNTNPVIV-------------GIDPELTSIANEPFPAVTIC--NLNQAL 122
                   |.||:|...|..:.|:.             .:..||.......||::.:.  |:.|..
 Worm   131 MRRIVVSYFIQEAQSIWVPDVVVCPYNRLNRSFIEANNVSFELAQFLELSFPSMDLPFENIQQQQ 195

  Fly   123 AERVEHFSNDSVEFAMLQLLCRRKVDVELVKTNDSRWEEFILNISQPCNSMVIHCRFGADDYECA 187
            .|.:...  |:::|         :::: |::.|:..:.:|:...|..|.:      |..|...||
 Worm   196 EEIISKI--DTLDF---------QIEI-LLEQNNMTYAQFLRKASLNCEA------FFEDSRRCA 242

  Fly   188 RLFHPIVTDEGLCCVFNML-----------HPRFMYRKRVPYSHRNISLPEGFH------AVNWH 235
            .... |:|..|.|  |.|.           ..|::           |.|||.::      .:|..
 Worm   243 NTTE-IMTSAGKC--FRMAGIKQEIAGFGNGDRYV-----------IDLPEEYYNPGINQMINSG 293

  Fly   236 AELGYRKRGFQPDGDNPLYPRRAQGTGESLGLSLTLDVQADAYYCSSSSSIGFKIALHSPNESPN 300
            ..:...:||...|.|....|.........||...........|.|               .|.|:
 Worm   294 VIIKLAERGQGIDNDLTFLPAGVHAIMPLLGTQFEFMNDPPRYEC---------------EEDPH 343

  Fly   301 VRETGVLLAPGMETKLRIDPSKILTEKHLRNVDRRSRRCLFHNELKLRWFAHYTQRNCVAECLSG 365
                                                              .:|::.:|..:||:.
 Worm   344 --------------------------------------------------GNYSRVHCFEDCLTL 358

  Fly   366 WLIRHCGCVTFYMPRLNAN----DTICPLHK-RECVELIRF-------RTIIAMESCLDECLPSC 418
            ...:.|.|    .|....|    |.:|...: ..|.....|       :.|:  ::|..||...|
 Worm   359 DAQQTCQC----SPAAAQNPAYPDKLCTATQLYHCFFTKLFPEDSNLSKAIV--DACKKECKAPC 417

  Fly   419 FDLSFS-AIAYSTRISLDGFRETPSNGGWNFTDAYVERSVAVVNMYFKDPTFRANKQTEFIGFSD 482
            ...::: .::||: |..:..::......|.    .::|.: ::::|:.:..:...|....:..|.
 Worm   418 HAWNYNKQVSYSS-IPSEASKKLLPREEWE----KMKRKI-ILDIYYSELDYTIIKHVIAMPLSS 476

  Fly   483 FLSGVGGLMGLFLGFSFLSIAECVYFA----LIRPC------RTCSEIRQLNQPRVHQ-MNLKR- 535
            .::.:||...||.|.|.:|:.:.|.::    :.:.|      |.|.|.|:.::.|..: |..:| 
 Worm   477 LIAQIGGQFSLFAGGSLISLCQIVIYSVRYVMHKFCGLKSQRRRCRETREAHEARQRRDMRRRRR 541

  Fly   536 --------SPTPGN 541
                    :|.|.|
 Worm   542 NSTSHSRSTPKPHN 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk8NP_001036260.3 ASC 42..508 CDD:279230 95/531 (18%)
del-9NP_508622.2 ASC 85..502 CDD:307141 94/528 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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